Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GRIK1P39086 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
GRIK1P39086 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.28■□□□□ 0.36
GRIK1P39086 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GRIK1P39086 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
GRIK1P39086 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
GRIK1P39086 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
GRIK1P39086 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
GRIK1P39086 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GRIK1P39086 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GRIK1P39086 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GRIK1P39086 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.27■□□□□ 0.36
GRIK1P39086 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GRIK1P39086 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GRIK1P39086 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GRIK1P39086 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GRIK1P39086 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
GRIK1P39086 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.27■□□□□ 0.36
GRIK1P39086 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.27■□□□□ 0.36
GRIK1P39086 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GRIK1P39086 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GRIK1P39086 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.27■□□□□ 0.36
GRIK1P39086 AL390955.2-201ENST00000603032 514 ntBASIC17.27■□□□□ 0.36
GRIK1P39086 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.36
GRIK1P39086 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.36
GRIK1P39086 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
GRIK1P39086 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GRIK1P39086 AC011676.5-201ENST00000624864 2660 ntBASIC17.27■□□□□ 0.35
GRIK1P39086 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.27■□□□□ 0.35
GRIK1P39086 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
GRIK1P39086 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
GRIK1P39086 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
GRIK1P39086 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
GRIK1P39086 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.27■□□□□ 0.35
GRIK1P39086 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
GRIK1P39086 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
GRIK1P39086 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GRIK1P39086 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GRIK1P39086 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GRIK1P39086 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.26■□□□□ 0.35
GRIK1P39086 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GRIK1P39086 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GRIK1P39086 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GRIK1P39086 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GRIK1P39086 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
GRIK1P39086 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
GRIK1P39086 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GRIK1P39086 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
GRIK1P39086 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GRIK1P39086 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GRIK1P39086 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
GRIK1P39086 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.26■□□□□ 0.35
GRIK1P39086 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.26■□□□□ 0.35
GRIK1P39086 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
GRIK1P39086 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GRIK1P39086 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GRIK1P39086 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
GRIK1P39086 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
GRIK1P39086 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.26■□□□□ 0.35
GRIK1P39086 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.26■□□□□ 0.35
GRIK1P39086 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.26■□□□□ 0.35
GRIK1P39086 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.26■□□□□ 0.35
GRIK1P39086 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.26■□□□□ 0.35
GRIK1P39086 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.26■□□□□ 0.35
GRIK1P39086 AC007967.4-201ENST00000614700 386 ntBASIC17.26■□□□□ 0.35
GRIK1P39086 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GRIK1P39086 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.26■□□□□ 0.35
GRIK1P39086 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GRIK1P39086 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.26■□□□□ 0.35
GRIK1P39086 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.26■□□□□ 0.35
GRIK1P39086 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.26■□□□□ 0.35
GRIK1P39086 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GRIK1P39086 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.26■□□□□ 0.35
GRIK1P39086 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
GRIK1P39086 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.25■□□□□ 0.35
GRIK1P39086 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GRIK1P39086 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.25■□□□□ 0.35
GRIK1P39086 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.25■□□□□ 0.35
GRIK1P39086 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GRIK1P39086 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
GRIK1P39086 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GRIK1P39086 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
GRIK1P39086 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
GRIK1P39086 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GRIK1P39086 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
GRIK1P39086 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.25■□□□□ 0.35
GRIK1P39086 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GRIK1P39086 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
GRIK1P39086 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.25■□□□□ 0.35
GRIK1P39086 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.25■□□□□ 0.35
GRIK1P39086 BASP1P1-201ENST00000430708 665 ntBASIC17.25■□□□□ 0.35
GRIK1P39086 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GRIK1P39086 AC024267.1-201ENST00000582320 895 ntBASIC17.25■□□□□ 0.35
GRIK1P39086 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.25■□□□□ 0.35
GRIK1P39086 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
GRIK1P39086 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GRIK1P39086 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.25■□□□□ 0.35
GRIK1P39086 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.25■□□□□ 0.35
GRIK1P39086 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
GRIK1P39086 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms