Protein–RNA interactions for Protein: P34903

GABRA3, Gamma-aminobutyric acid receptor subunit alpha-3, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3P34903 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.3■□□□□ 0.04
GABRA3P34903 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.3■□□□□ 0.04
GABRA3P34903 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.3■□□□□ 0.04
GABRA3P34903 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GABRA3P34903 AC112191.1-201ENST00000523689 701 ntBASIC15.3■□□□□ 0.04
GABRA3P34903 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
GABRA3P34903 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GABRA3P34903 AC040169.1-201ENST00000565382 521 ntBASIC15.3■□□□□ 0.04
GABRA3P34903 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.3■□□□□ 0.04
GABRA3P34903 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
GABRA3P34903 AC016027.1-202ENST00000607927 1699 ntBASIC15.3■□□□□ 0.04
GABRA3P34903 AC018695.7-201ENST00000624587 2492 ntBASIC15.3■□□□□ 0.04
GABRA3P34903 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.3■□□□□ 0.04
GABRA3P34903 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
GABRA3P34903 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GABRA3P34903 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
GABRA3P34903 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
GABRA3P34903 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
GABRA3P34903 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GABRA3P34903 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.29■□□□□ 0.04
GABRA3P34903 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.29■□□□□ 0.04
GABRA3P34903 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
GABRA3P34903 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.29■□□□□ 0.04
GABRA3P34903 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.29■□□□□ 0.04
GABRA3P34903 REXO1L8P-201ENST00000604378 1897 ntBASIC15.29■□□□□ 0.04
GABRA3P34903 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GABRA3P34903 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GABRA3P34903 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.29■□□□□ 0.04
GABRA3P34903 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GABRA3P34903 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.29■□□□□ 0.04
GABRA3P34903 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GABRA3P34903 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GABRA3P34903 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
GABRA3P34903 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.29■□□□□ 0.04
GABRA3P34903 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
GABRA3P34903 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GABRA3P34903 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GABRA3P34903 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.29■□□□□ 0.04
GABRA3P34903 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
GABRA3P34903 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.29■□□□□ 0.04
GABRA3P34903 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GABRA3P34903 AL078644.1-201ENST00000609881 752 ntBASIC15.29■□□□□ 0.04
GABRA3P34903 AL161645.1-201ENST00000622716 1255 ntBASIC15.29■□□□□ 0.04
GABRA3P34903 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GABRA3P34903 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.29■□□□□ 0.04
GABRA3P34903 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.29■□□□□ 0.04
GABRA3P34903 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GABRA3P34903 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GABRA3P34903 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GABRA3P34903 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GABRA3P34903 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GABRA3P34903 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GABRA3P34903 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.29■□□□□ 0.04
GABRA3P34903 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA3P34903 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA3P34903 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA3P34903 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA3P34903 MTHFR-217ENST00000641820 1569 ntBASIC15.28■□□□□ 0.04
GABRA3P34903 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA3P34903 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
GABRA3P34903 AC006449.6-201ENST00000612330 2296 ntBASIC15.28■□□□□ 0.04
GABRA3P34903 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA3P34903 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.28■□□□□ 0.04
GABRA3P34903 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.28■□□□□ 0.04
GABRA3P34903 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA3P34903 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.28■□□□□ 0.04
GABRA3P34903 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
GABRA3P34903 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA3P34903 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.28■□□□□ 0.04
GABRA3P34903 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.28■□□□□ 0.04
GABRA3P34903 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.28■□□□□ 0.04
GABRA3P34903 AP000347.1-202ENST00000435868 847 ntBASIC15.28■□□□□ 0.04
GABRA3P34903 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
GABRA3P34903 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.28■□□□□ 0.04
GABRA3P34903 AC002347.1-201ENST00000569543 541 ntBASIC15.28■□□□□ 0.04
GABRA3P34903 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
GABRA3P34903 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA3P34903 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.28■□□□□ 0.04
GABRA3P34903 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA3P34903 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA3P34903 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA3P34903 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA3P34903 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA3P34903 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.28■□□□□ 0.04
GABRA3P34903 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA3P34903 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA3P34903 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
GABRA3P34903 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA3P34903 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GABRA3P34903 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.27■□□□□ 0.04
GABRA3P34903 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GABRA3P34903 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
GABRA3P34903 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GABRA3P34903 WASH6P-202ENST00000359512 1437 ntBASIC15.27■□□□□ 0.04
GABRA3P34903 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
GABRA3P34903 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GABRA3P34903 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GABRA3P34903 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.27■□□□□ 0.04
GABRA3P34903 PMS2P7-201ENST00000506558 1336 ntBASIC15.27■□□□□ 0.04
GABRA3P34903 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms