Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.16■□□□□ 0.18
CDH3P22223 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH3P22223 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.16■□□□□ 0.18
CDH3P22223 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.16■□□□□ 0.18
CDH3P22223 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH3P22223 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH3P22223 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.16■□□□□ 0.18
CDH3P22223 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.16■□□□□ 0.18
CDH3P22223 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
CDH3P22223 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH3P22223 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH3P22223 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH3P22223 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH3P22223 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH3P22223 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH3P22223 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.16■□□□□ 0.18
CDH3P22223 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH3P22223 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CDH3P22223 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDH3P22223 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH3P22223 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH3P22223 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH3P22223 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CDH3P22223 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH3P22223 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH3P22223 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDH3P22223 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDH3P22223 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CDH3P22223 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CDH3P22223 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH3P22223 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH3P22223 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.15■□□□□ 0.18
CDH3P22223 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
CDH3P22223 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH3P22223 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CDH3P22223 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH3P22223 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH3P22223 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH3P22223 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH3P22223 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH3P22223 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH3P22223 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH3P22223 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH3P22223 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.15■□□□□ 0.18
CDH3P22223 AL671277.1-201ENST00000429656 993 ntBASIC16.15■□□□□ 0.18
CDH3P22223 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CDH3P22223 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH3P22223 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH3P22223 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH3P22223 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.15■□□□□ 0.18
CDH3P22223 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
CDH3P22223 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.15■□□□□ 0.18
CDH3P22223 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH3P22223 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
CDH3P22223 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.15■□□□□ 0.18
CDH3P22223 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH3P22223 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.15■□□□□ 0.18
CDH3P22223 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.15■□□□□ 0.18
CDH3P22223 AL031055.1-201ENST00000606362 631 ntBASIC16.15■□□□□ 0.18
CDH3P22223 AC007950.2-201ENST00000615045 2347 ntBASIC16.15■□□□□ 0.18
CDH3P22223 AL161645.1-201ENST00000622716 1255 ntBASIC16.15■□□□□ 0.18
CDH3P22223 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDH3P22223 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CDH3P22223 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CDH3P22223 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.15■□□□□ 0.18
CDH3P22223 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH3P22223 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CDH3P22223 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDH3P22223 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CDH3P22223 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
CDH3P22223 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
CDH3P22223 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
CDH3P22223 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH3P22223 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CDH3P22223 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH3P22223 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH3P22223 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH3P22223 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.14■□□□□ 0.17
CDH3P22223 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH3P22223 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH3P22223 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.14■□□□□ 0.17
CDH3P22223 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CDH3P22223 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH3P22223 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH3P22223 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.14■□□□□ 0.17
CDH3P22223 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.14■□□□□ 0.17
CDH3P22223 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH3P22223 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH3P22223 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.14■□□□□ 0.17
CDH3P22223 TIMM8BP1-201ENST00000452384 211 ntBASIC16.14■□□□□ 0.17
CDH3P22223 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.14■□□□□ 0.17
CDH3P22223 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH3P22223 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.14■□□□□ 0.17
CDH3P22223 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
CDH3P22223 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.14■□□□□ 0.17
CDH3P22223 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.14■□□□□ 0.17
CDH3P22223 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.14■□□□□ 0.17
CDH3P22223 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.14■□□□□ 0.17
CDH3P22223 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.14■□□□□ 0.17
CDH3P22223 CYP2A7P1-201ENST00000595391 815 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms