Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL9A1P20849 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.75■□□□□ 0.27
COL9A1P20849 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL9A1P20849 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
COL9A1P20849 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
COL9A1P20849 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COL9A1P20849 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.75■□□□□ 0.27
COL9A1P20849 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COL9A1P20849 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
COL9A1P20849 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL9A1P20849 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL9A1P20849 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL9A1P20849 AC018470.1-201ENST00000624790 3129 ntBASIC16.74■□□□□ 0.27
COL9A1P20849 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL9A1P20849 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.74■□□□□ 0.27
COL9A1P20849 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.74■□□□□ 0.27
COL9A1P20849 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
COL9A1P20849 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
COL9A1P20849 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL9A1P20849 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL9A1P20849 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL9A1P20849 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL9A1P20849 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL9A1P20849 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
COL9A1P20849 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
COL9A1P20849 CDC14C-201ENST00000428251 1719 ntBASIC16.74■□□□□ 0.27
COL9A1P20849 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL9A1P20849 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL9A1P20849 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
COL9A1P20849 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL9A1P20849 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.74■□□□□ 0.27
COL9A1P20849 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.74■□□□□ 0.27
COL9A1P20849 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.74■□□□□ 0.27
COL9A1P20849 PRYP6-201ENST00000514804 343 ntBASIC16.74■□□□□ 0.27
COL9A1P20849 IQSEC3P1-201ENST00000538799 536 ntBASIC16.74■□□□□ 0.27
COL9A1P20849 MIR3619-201ENST00000579667 83 ntBASIC16.74■□□□□ 0.27
COL9A1P20849 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.74■□□□□ 0.27
COL9A1P20849 AC005357.2-202ENST00000590507 1060 ntBASIC16.74■□□□□ 0.27
COL9A1P20849 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC16.74■□□□□ 0.27
COL9A1P20849 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL9A1P20849 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL9A1P20849 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
COL9A1P20849 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL9A1P20849 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
COL9A1P20849 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
COL9A1P20849 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.74■□□□□ 0.27
COL9A1P20849 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL9A1P20849 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL9A1P20849 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
COL9A1P20849 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
COL9A1P20849 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL9A1P20849 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL9A1P20849 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
COL9A1P20849 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL9A1P20849 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL9A1P20849 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
COL9A1P20849 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL9A1P20849 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL9A1P20849 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL9A1P20849 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
COL9A1P20849 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL9A1P20849 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL9A1P20849 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.73■□□□□ 0.27
COL9A1P20849 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.73■□□□□ 0.27
COL9A1P20849 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.73■□□□□ 0.27
COL9A1P20849 BCRP2-202ENST00000447763 634 ntBASIC16.73■□□□□ 0.27
COL9A1P20849 FTLP10-202ENST00000505798 471 ntBASIC16.73■□□□□ 0.27
COL9A1P20849 BCRP6-201ENST00000510112 632 ntBASIC16.73■□□□□ 0.27
COL9A1P20849 BCRP7-201ENST00000511549 544 ntBASIC16.73■□□□□ 0.27
COL9A1P20849 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC16.73■□□□□ 0.27
COL9A1P20849 AC124947.2-201ENST00000547118 1133 ntBASIC16.73■□□□□ 0.27
COL9A1P20849 AL512361.1-201ENST00000554200 418 ntBASIC16.73■□□□□ 0.27
COL9A1P20849 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.73■□□□□ 0.27
COL9A1P20849 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.73■□□□□ 0.27
COL9A1P20849 DGAT2L7P-201ENST00000602462 744 ntBASIC16.73■□□□□ 0.27
COL9A1P20849 MIR6756-201ENST00000616240 63 ntBASIC16.73■□□□□ 0.27
COL9A1P20849 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.73■□□□□ 0.27
COL9A1P20849 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.73■□□□□ 0.27
COL9A1P20849 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL9A1P20849 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.73■□□□□ 0.27
COL9A1P20849 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL9A1P20849 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL9A1P20849 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL9A1P20849 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.73■□□□□ 0.27
COL9A1P20849 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL9A1P20849 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL9A1P20849 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.73■□□□□ 0.27
COL9A1P20849 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.73■□□□□ 0.27
COL9A1P20849 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
COL9A1P20849 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL9A1P20849 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
COL9A1P20849 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.72■□□□□ 0.27
COL9A1P20849 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL9A1P20849 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COL9A1P20849 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.72■□□□□ 0.27
COL9A1P20849 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
COL9A1P20849 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL9A1P20849 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL9A1P20849 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.72■□□□□ 0.27
COL9A1P20849 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms