Protein–RNA interactions for Protein: P17787

CHRNB2, Neuronal acetylcholine receptor subunit beta-2, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB2P17787 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.38■□□□□ 0.37
CHRNB2P17787 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNB2P17787 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.38■□□□□ 0.37
CHRNB2P17787 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.38■□□□□ 0.37
CHRNB2P17787 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.38■□□□□ 0.37
CHRNB2P17787 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CHRNB2P17787 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNB2P17787 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNB2P17787 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.38■□□□□ 0.37
CHRNB2P17787 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CHRNB2P17787 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNB2P17787 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNB2P17787 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNB2P17787 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CHRNB2P17787 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNB2P17787 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNB2P17787 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNB2P17787 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNB2P17787 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNB2P17787 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNB2P17787 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNB2P17787 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNB2P17787 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNB2P17787 PKD1P1-201ENST00000458669 6805 ntBASIC17.37■□□□□ 0.37
CHRNB2P17787 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNB2P17787 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNB2P17787 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CHRNB2P17787 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNB2P17787 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.37■□□□□ 0.37
CHRNB2P17787 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CHRNB2P17787 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNB2P17787 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.37■□□□□ 0.37
CHRNB2P17787 AC002056.1-201ENST00000395613 760 ntBASIC17.37■□□□□ 0.37
CHRNB2P17787 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNB2P17787 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.37■□□□□ 0.37
CHRNB2P17787 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.37■□□□□ 0.37
CHRNB2P17787 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNB2P17787 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.37■□□□□ 0.37
CHRNB2P17787 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.37■□□□□ 0.37
CHRNB2P17787 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.37■□□□□ 0.37
CHRNB2P17787 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.37■□□□□ 0.37
CHRNB2P17787 AL161645.1-201ENST00000622716 1255 ntBASIC17.37■□□□□ 0.37
CHRNB2P17787 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.37■□□□□ 0.37
CHRNB2P17787 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNB2P17787 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNB2P17787 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNB2P17787 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNB2P17787 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
CHRNB2P17787 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.37■□□□□ 0.37
CHRNB2P17787 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNB2P17787 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CHRNB2P17787 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.37■□□□□ 0.37
CHRNB2P17787 AP005117.1-202ENST00000581724 1908 ntBASIC17.37■□□□□ 0.37
CHRNB2P17787 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.37■□□□□ 0.37
CHRNB2P17787 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CHRNB2P17787 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.37■□□□□ 0.37
CHRNB2P17787 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.37■□□□□ 0.37
CHRNB2P17787 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNB2P17787 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.37■□□□□ 0.37
CHRNB2P17787 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNB2P17787 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNB2P17787 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.36■□□□□ 0.37
CHRNB2P17787 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNB2P17787 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNB2P17787 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.36■□□□□ 0.37
CHRNB2P17787 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNB2P17787 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
CHRNB2P17787 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
CHRNB2P17787 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNB2P17787 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNB2P17787 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CHRNB2P17787 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNB2P17787 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNB2P17787 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNB2P17787 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.36■□□□□ 0.37
CHRNB2P17787 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.36■□□□□ 0.37
CHRNB2P17787 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CHRNB2P17787 PRYP6-201ENST00000514804 343 ntBASIC17.36■□□□□ 0.37
CHRNB2P17787 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.36■□□□□ 0.37
CHRNB2P17787 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.36■□□□□ 0.37
CHRNB2P17787 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNB2P17787 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.36■□□□□ 0.37
CHRNB2P17787 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNB2P17787 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CHRNB2P17787 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNB2P17787 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNB2P17787 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNB2P17787 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNB2P17787 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CHRNB2P17787 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNB2P17787 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNB2P17787 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
CHRNB2P17787 FOXO1B-201ENST00000504678 1527 ntBASIC17.36■□□□□ 0.37
CHRNB2P17787 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.36■□□□□ 0.37
CHRNB2P17787 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.36■□□□□ 0.37
CHRNB2P17787 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNB2P17787 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNB2P17787 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.36■□□□□ 0.37
CHRNB2P17787 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.35■□□□□ 0.37
CHRNB2P17787 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms