Protein–RNA interactions for Protein: P11229

CHRM1, Muscarinic acetylcholine receptor M1, humanhuman

Predicted RBP Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM1P11229 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHRM1P11229 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHRM1P11229 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CHRM1P11229 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CHRM1P11229 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC17.39■□□□□ 0.38
CHRM1P11229 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CHRM1P11229 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
CHRM1P11229 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CHRM1P11229 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CHRM1P11229 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CHRM1P11229 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRM1P11229 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CHRM1P11229 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRM1P11229 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRM1P11229 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHRM1P11229 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC17.39■□□□□ 0.37
CHRM1P11229 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRM1P11229 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRM1P11229 AL009178.2-201ENST00000597278 2719 ntBASIC17.39■□□□□ 0.37
CHRM1P11229 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHRM1P11229 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CHRM1P11229 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
CHRM1P11229 HLA-J-203ENST00000494367 1087 ntBASIC17.39■□□□□ 0.37
CHRM1P11229 TRIM36-IT1-201ENST00000503723 881 ntBASIC17.39■□□□□ 0.37
CHRM1P11229 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.39■□□□□ 0.37
CHRM1P11229 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.39■□□□□ 0.37
CHRM1P11229 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRM1P11229 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.39■□□□□ 0.37
CHRM1P11229 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHRM1P11229 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRM1P11229 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRM1P11229 AL138688.1-201ENST00000624851 1594 ntBASIC17.39■□□□□ 0.37
CHRM1P11229 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRM1P11229 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRM1P11229 AC104640.1-201ENST00000562617 2109 ntBASIC17.39■□□□□ 0.37
CHRM1P11229 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRM1P11229 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRM1P11229 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.39■□□□□ 0.37
CHRM1P11229 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRM1P11229 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
CHRM1P11229 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRM1P11229 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.39■□□□□ 0.37
CHRM1P11229 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRM1P11229 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRM1P11229 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.38■□□□□ 0.37
CHRM1P11229 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRM1P11229 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRM1P11229 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
CHRM1P11229 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CHRM1P11229 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CHRM1P11229 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.38■□□□□ 0.37
CHRM1P11229 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRM1P11229 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRM1P11229 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHRM1P11229 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.38■□□□□ 0.37
CHRM1P11229 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.38■□□□□ 0.37
CHRM1P11229 AC109322.1-201ENST00000524499 1264 ntBASIC17.38■□□□□ 0.37
CHRM1P11229 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.38■□□□□ 0.37
CHRM1P11229 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.38■□□□□ 0.37
CHRM1P11229 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
CHRM1P11229 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRM1P11229 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHRM1P11229 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHRM1P11229 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRM1P11229 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.38■□□□□ 0.37
CHRM1P11229 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRM1P11229 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRM1P11229 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.38■□□□□ 0.37
CHRM1P11229 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRM1P11229 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.38■□□□□ 0.37
CHRM1P11229 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CHRM1P11229 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHRM1P11229 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC17.38■□□□□ 0.37
CHRM1P11229 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRM1P11229 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRM1P11229 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.37■□□□□ 0.37
CHRM1P11229 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CHRM1P11229 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CHRM1P11229 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRM1P11229 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRM1P11229 AC132872.4-202ENST00000622924 2756 ntBASIC17.37■□□□□ 0.37
CHRM1P11229 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CHRM1P11229 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.37■□□□□ 0.37
CHRM1P11229 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRM1P11229 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CHRM1P11229 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CHRM1P11229 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRM1P11229 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.37■□□□□ 0.37
CHRM1P11229 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRM1P11229 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
CHRM1P11229 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.37■□□□□ 0.37
CHRM1P11229 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC17.37■□□□□ 0.37
CHRM1P11229 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.37■□□□□ 0.37
CHRM1P11229 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.37■□□□□ 0.37
CHRM1P11229 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRM1P11229 MIR3197-201ENST00000582241 73 ntBASIC17.37■□□□□ 0.37
CHRM1P11229 AC004835.2-201ENST00000603762 682 ntBASIC17.37■□□□□ 0.37
CHRM1P11229 AC106028.4-201ENST00000614509 607 ntBASIC17.37■□□□□ 0.37
CHRM1P11229 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.37■□□□□ 0.37
CHRM1P11229 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms