Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBCP0CG48 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBCP0CG48 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.47□□□□□ -0.09
UBCP0CG48 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBCP0CG48 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBCP0CG48 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
UBCP0CG48 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
UBCP0CG48 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBCP0CG48 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
UBCP0CG48 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBCP0CG48 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.47□□□□□ -0.09
UBCP0CG48 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBCP0CG48 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
UBCP0CG48 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.47□□□□□ -0.09
UBCP0CG48 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
UBCP0CG48 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.47□□□□□ -0.09
UBCP0CG48 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC14.47□□□□□ -0.09
UBCP0CG48 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.47□□□□□ -0.09
UBCP0CG48 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.47□□□□□ -0.09
UBCP0CG48 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.47□□□□□ -0.09
UBCP0CG48 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.47□□□□□ -0.09
UBCP0CG48 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.47□□□□□ -0.09
UBCP0CG48 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.47□□□□□ -0.09
UBCP0CG48 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
UBCP0CG48 REXO1L6P-202ENST00000619970 1078 ntBASIC14.47□□□□□ -0.09
UBCP0CG48 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
UBCP0CG48 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.47□□□□□ -0.09
UBCP0CG48 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
UBCP0CG48 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.47□□□□□ -0.09
UBCP0CG48 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.47□□□□□ -0.09
UBCP0CG48 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.47□□□□□ -0.09
UBCP0CG48 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBCP0CG48 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
UBCP0CG48 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBCP0CG48 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBCP0CG48 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.47□□□□□ -0.09
UBCP0CG48 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.47□□□□□ -0.09
UBCP0CG48 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBCP0CG48 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.47□□□□□ -0.09
UBCP0CG48 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
UBCP0CG48 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBCP0CG48 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBCP0CG48 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UBCP0CG48 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBCP0CG48 AC126177.1-201ENST00000547829 2218 ntBASIC14.46□□□□□ -0.09
UBCP0CG48 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBCP0CG48 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UBCP0CG48 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBCP0CG48 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBCP0CG48 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBCP0CG48 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBCP0CG48 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBCP0CG48 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBCP0CG48 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UBCP0CG48 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBCP0CG48 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBCP0CG48 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBCP0CG48 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
UBCP0CG48 ARMC10P1-201ENST00000313754 855 ntBASIC14.46□□□□□ -0.09
UBCP0CG48 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBCP0CG48 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.46□□□□□ -0.09
UBCP0CG48 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.46□□□□□ -0.09
UBCP0CG48 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBCP0CG48 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBCP0CG48 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
UBCP0CG48 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.46□□□□□ -0.09
UBCP0CG48 AC091304.2-201ENST00000564639 760 ntBASIC14.46□□□□□ -0.09
UBCP0CG48 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
UBCP0CG48 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.46□□□□□ -0.09
UBCP0CG48 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.46□□□□□ -0.09
UBCP0CG48 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.46□□□□□ -0.09
UBCP0CG48 LINC01711-201ENST00000598340 967 ntBASIC14.46□□□□□ -0.09
UBCP0CG48 AC025062.2-201ENST00000605477 670 ntBASIC14.46□□□□□ -0.09
UBCP0CG48 AC010654.1-201ENST00000615722 808 ntBASIC14.46□□□□□ -0.09
UBCP0CG48 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.46□□□□□ -0.09
UBCP0CG48 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBCP0CG48 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBCP0CG48 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBCP0CG48 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UBCP0CG48 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBCP0CG48 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
UBCP0CG48 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
UBCP0CG48 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
UBCP0CG48 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.46□□□□□ -0.09
UBCP0CG48 DBET-201ENST00000630918 3363 ntBASIC14.46□□□□□ -0.1
UBCP0CG48 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
UBCP0CG48 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.46□□□□□ -0.1
UBCP0CG48 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
UBCP0CG48 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
UBCP0CG48 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
UBCP0CG48 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
UBCP0CG48 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBCP0CG48 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
UBCP0CG48 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBCP0CG48 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
UBCP0CG48 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.45□□□□□ -0.1
UBCP0CG48 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
UBCP0CG48 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBCP0CG48 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBCP0CG48 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms