Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HOXC6P09630 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HOXC6P09630 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
HOXC6P09630 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXC6P09630 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.38■□□□□ 0.53
HOXC6P09630 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
HOXC6P09630 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXC6P09630 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.38■□□□□ 0.53
HOXC6P09630 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
HOXC6P09630 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXC6P09630 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXC6P09630 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HOXC6P09630 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.38■□□□□ 0.53
HOXC6P09630 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXC6P09630 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.38■□□□□ 0.53
HOXC6P09630 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HOXC6P09630 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.38■□□□□ 0.53
HOXC6P09630 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
HOXC6P09630 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.38■□□□□ 0.53
HOXC6P09630 AC008735.3-201ENST00000596646 500 ntBASIC18.38■□□□□ 0.53
HOXC6P09630 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HOXC6P09630 AL033527.5-201ENST00000641382 801 ntBASIC18.38■□□□□ 0.53
HOXC6P09630 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HOXC6P09630 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.38■□□□□ 0.53
HOXC6P09630 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.38■□□□□ 0.53
HOXC6P09630 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.38■□□□□ 0.53
HOXC6P09630 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
HOXC6P09630 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXC6P09630 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXC6P09630 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HOXC6P09630 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXC6P09630 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HOXC6P09630 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HOXC6P09630 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXC6P09630 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.37■□□□□ 0.53
HOXC6P09630 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXC6P09630 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.37■□□□□ 0.53
HOXC6P09630 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXC6P09630 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
HOXC6P09630 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXC6P09630 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXC6P09630 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.37■□□□□ 0.53
HOXC6P09630 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
HOXC6P09630 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.37■□□□□ 0.53
HOXC6P09630 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HOXC6P09630 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXC6P09630 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXC6P09630 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.37■□□□□ 0.53
HOXC6P09630 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXC6P09630 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXC6P09630 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.37■□□□□ 0.53
HOXC6P09630 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXC6P09630 BOLA2P3-201ENST00000404566 256 ntBASIC18.37■□□□□ 0.53
HOXC6P09630 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.37■□□□□ 0.53
HOXC6P09630 AC234783.1-201ENST00000441761 496 ntBASIC18.37■□□□□ 0.53
HOXC6P09630 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.37■□□□□ 0.53
HOXC6P09630 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.37■□□□□ 0.53
HOXC6P09630 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.37■□□□□ 0.53
HOXC6P09630 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.37■□□□□ 0.53
HOXC6P09630 MIR6775-201ENST00000617557 69 ntBASIC18.37■□□□□ 0.53
HOXC6P09630 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.37■□□□□ 0.53
HOXC6P09630 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HOXC6P09630 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
HOXC6P09630 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.37■□□□□ 0.53
HOXC6P09630 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
HOXC6P09630 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
HOXC6P09630 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
HOXC6P09630 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXC6P09630 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXC6P09630 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HOXC6P09630 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.37■□□□□ 0.53
HOXC6P09630 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HOXC6P09630 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXC6P09630 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXC6P09630 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HOXC6P09630 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXC6P09630 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXC6P09630 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXC6P09630 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.36■□□□□ 0.53
HOXC6P09630 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXC6P09630 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HOXC6P09630 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.36■□□□□ 0.53
HOXC6P09630 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXC6P09630 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXC6P09630 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
HOXC6P09630 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.36■□□□□ 0.53
HOXC6P09630 CDC14C-201ENST00000428251 1719 ntBASIC18.36■□□□□ 0.53
HOXC6P09630 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
HOXC6P09630 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.36■□□□□ 0.53
HOXC6P09630 KRT223P-202ENST00000449164 1292 ntBASIC18.36■□□□□ 0.53
HOXC6P09630 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.36■□□□□ 0.53
HOXC6P09630 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.36■□□□□ 0.53
HOXC6P09630 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.36■□□□□ 0.53
HOXC6P09630 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.36■□□□□ 0.53
HOXC6P09630 TIMM17BP1-201ENST00000545713 516 ntBASIC18.36■□□□□ 0.53
HOXC6P09630 AC092552.1-201ENST00000547243 906 ntBASIC18.36■□□□□ 0.53
HOXC6P09630 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.36■□□□□ 0.53
HOXC6P09630 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.36■□□□□ 0.53
HOXC6P09630 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.36■□□□□ 0.53
HOXC6P09630 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms