Protein–RNA interactions for Protein: P04628

WNT1, Proto-oncogene Wnt-1, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT1P04628 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
WNT1P04628 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
WNT1P04628 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
WNT1P04628 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.04■□□□□ 0.16
WNT1P04628 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.04■□□□□ 0.16
WNT1P04628 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
WNT1P04628 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
WNT1P04628 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
WNT1P04628 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
WNT1P04628 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
WNT1P04628 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.03■□□□□ 0.16
WNT1P04628 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
WNT1P04628 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
WNT1P04628 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
WNT1P04628 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
WNT1P04628 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
WNT1P04628 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.03■□□□□ 0.16
WNT1P04628 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
WNT1P04628 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
WNT1P04628 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
WNT1P04628 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
WNT1P04628 AC098614.1-201ENST00000368528 745 ntBASIC16.03■□□□□ 0.16
WNT1P04628 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
WNT1P04628 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
WNT1P04628 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
WNT1P04628 INE1-201ENST00000456273 945 ntBASIC16.03■□□□□ 0.16
WNT1P04628 SERBP1P3-201ENST00000459980 809 ntBASIC16.03■□□□□ 0.16
WNT1P04628 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.03■□□□□ 0.16
WNT1P04628 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
WNT1P04628 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.03■□□□□ 0.16
WNT1P04628 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
WNT1P04628 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
WNT1P04628 AC008494.3-201ENST00000606615 944 ntBASIC16.03■□□□□ 0.16
WNT1P04628 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.03■□□□□ 0.16
WNT1P04628 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.03■□□□□ 0.16
WNT1P04628 AC004461.2-201ENST00000629517 803 ntBASIC16.03■□□□□ 0.16
WNT1P04628 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
WNT1P04628 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
WNT1P04628 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
WNT1P04628 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
WNT1P04628 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.03■□□□□ 0.16
WNT1P04628 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
WNT1P04628 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
WNT1P04628 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.03■□□□□ 0.16
WNT1P04628 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
WNT1P04628 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
WNT1P04628 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
WNT1P04628 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
WNT1P04628 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
WNT1P04628 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
WNT1P04628 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
WNT1P04628 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
WNT1P04628 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
WNT1P04628 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
WNT1P04628 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
WNT1P04628 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
WNT1P04628 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
WNT1P04628 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
WNT1P04628 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
WNT1P04628 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
WNT1P04628 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
WNT1P04628 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.02■□□□□ 0.16
WNT1P04628 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.16
WNT1P04628 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
WNT1P04628 AL589987.1-201ENST00000453380 819 ntBASIC16.02■□□□□ 0.16
WNT1P04628 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
WNT1P04628 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
WNT1P04628 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.02■□□□□ 0.16
WNT1P04628 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.02■□□□□ 0.16
WNT1P04628 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.02■□□□□ 0.16
WNT1P04628 AL359881.2-201ENST00000602973 570 ntBASIC16.02■□□□□ 0.16
WNT1P04628 SRD5A3P1-201ENST00000603021 949 ntBASIC16.02■□□□□ 0.16
WNT1P04628 AC026979.3-201ENST00000607315 403 ntBASIC16.02■□□□□ 0.16
WNT1P04628 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
WNT1P04628 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
WNT1P04628 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
WNT1P04628 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
WNT1P04628 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
WNT1P04628 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
WNT1P04628 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
WNT1P04628 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.02■□□□□ 0.15
WNT1P04628 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.02■□□□□ 0.15
WNT1P04628 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
WNT1P04628 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.02■□□□□ 0.15
WNT1P04628 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.02■□□□□ 0.15
WNT1P04628 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
WNT1P04628 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
WNT1P04628 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
WNT1P04628 AL391825.1-201ENST00000457671 1364 ntBASIC16.01■□□□□ 0.15
WNT1P04628 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
WNT1P04628 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.01■□□□□ 0.15
WNT1P04628 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
WNT1P04628 AC006538.1-201ENST00000567905 1585 ntBASIC16.01■□□□□ 0.15
WNT1P04628 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
WNT1P04628 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
WNT1P04628 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.01■□□□□ 0.15
WNT1P04628 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
WNT1P04628 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
WNT1P04628 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
WNT1P04628 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms