Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.41□□□□□ -0.1
LCATP04180 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LCATP04180 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LCATP04180 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LCATP04180 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.41□□□□□ -0.1
LCATP04180 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
LCATP04180 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.41□□□□□ -0.1
LCATP04180 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LCATP04180 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.41□□□□□ -0.1
LCATP04180 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LCATP04180 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.41□□□□□ -0.1
LCATP04180 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
LCATP04180 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LCATP04180 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.41□□□□□ -0.1
LCATP04180 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.41□□□□□ -0.1
LCATP04180 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.41□□□□□ -0.1
LCATP04180 AC023141.13-201ENST00000604991 943 ntBASIC14.41□□□□□ -0.1
LCATP04180 AL031055.1-201ENST00000606362 631 ntBASIC14.41□□□□□ -0.1
LCATP04180 AC010507.1-201ENST00000633895 436 ntBASIC14.41□□□□□ -0.1
LCATP04180 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LCATP04180 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LCATP04180 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LCATP04180 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LCATP04180 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LCATP04180 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.41□□□□□ -0.1
LCATP04180 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
LCATP04180 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LCATP04180 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LCATP04180 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LCATP04180 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LCATP04180 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LCATP04180 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.41□□□□□ -0.1
LCATP04180 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LCATP04180 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LCATP04180 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.41□□□□□ -0.1
LCATP04180 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LCATP04180 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LCATP04180 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.41□□□□□ -0.1
LCATP04180 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
LCATP04180 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LCATP04180 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LCATP04180 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.41□□□□□ -0.1
LCATP04180 IL9RP2-201ENST00000423948 1312 ntBASIC14.41□□□□□ -0.1
LCATP04180 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.41□□□□□ -0.1
LCATP04180 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LCATP04180 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LCATP04180 AL162727.3-201ENST00000635661 2787 ntBASIC14.4□□□□□ -0.1
LCATP04180 AL596257.1-201ENST00000641463 2694 ntBASIC14.4□□□□□ -0.1
LCATP04180 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LCATP04180 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LCATP04180 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LCATP04180 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LCATP04180 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LCATP04180 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LCATP04180 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.4□□□□□ -0.1
LCATP04180 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
LCATP04180 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.4□□□□□ -0.1
LCATP04180 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LCATP04180 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LCATP04180 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.4□□□□□ -0.1
LCATP04180 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.4□□□□□ -0.1
LCATP04180 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LCATP04180 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.4□□□□□ -0.1
LCATP04180 RNU1-129P-201ENST00000384064 167 ntBASIC14.4□□□□□ -0.1
LCATP04180 AL590627.1-203ENST00000421194 1026 ntBASIC14.4□□□□□ -0.1
LCATP04180 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.4□□□□□ -0.1
LCATP04180 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.4□□□□□ -0.1
LCATP04180 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
LCATP04180 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.4□□□□□ -0.1
LCATP04180 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.4□□□□□ -0.1
LCATP04180 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.1
LCATP04180 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.4□□□□□ -0.1
LCATP04180 U1.21-201ENST00000580816 167 ntBASIC14.4□□□□□ -0.1
LCATP04180 AC021097.1-201ENST00000607902 574 ntBASIC14.4□□□□□ -0.1
LCATP04180 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.4□□□□□ -0.1
LCATP04180 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
LCATP04180 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LCATP04180 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LCATP04180 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
LCATP04180 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.4□□□□□ -0.1
LCATP04180 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.4□□□□□ -0.1
LCATP04180 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LCATP04180 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.4□□□□□ -0.1
LCATP04180 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
LCATP04180 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LCATP04180 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.4□□□□□ -0.1
LCATP04180 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.4□□□□□ -0.1
LCATP04180 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LCATP04180 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LCATP04180 CICP6-201ENST00000457191 2729 ntBASIC14.4□□□□□ -0.1
LCATP04180 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LCATP04180 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.4□□□□□ -0.1
LCATP04180 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LCATP04180 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LCATP04180 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LCATP04180 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LCATP04180 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
LCATP04180 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LCATP04180 AC008741.2-201ENST00000612792 3115 ntBASIC14.39□□□□□ -0.11
LCATP04180 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms