Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 SLC22A20-204ENST00000530038 1673 ntBASIC18.87■□□□□ 0.61
MBD3O95983 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
MBD3O95983 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.87■□□□□ 0.61
MBD3O95983 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.87■□□□□ 0.61
MBD3O95983 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
MBD3O95983 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MBD3O95983 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.87■□□□□ 0.61
MBD3O95983 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MBD3O95983 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MBD3O95983 AC068587.6-202ENST00000641839 5619 ntBASIC18.87■□□□□ 0.61
MBD3O95983 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MBD3O95983 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MBD3O95983 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MBD3O95983 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
MBD3O95983 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
MBD3O95983 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MBD3O95983 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
MBD3O95983 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MBD3O95983 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
MBD3O95983 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.86■□□□□ 0.61
MBD3O95983 AC067930.6-201ENST00000623257 4947 ntBASIC18.86■□□□□ 0.61
MBD3O95983 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.86■□□□□ 0.61
MBD3O95983 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MBD3O95983 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
MBD3O95983 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
MBD3O95983 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
MBD3O95983 PMS2P1-201ENST00000431037 1228 ntBASIC18.86■□□□□ 0.61
MBD3O95983 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.86■□□□□ 0.61
MBD3O95983 AC087163.2-201ENST00000457299 853 ntBASIC18.86■□□□□ 0.61
MBD3O95983 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MBD3O95983 AC022616.7-201ENST00000525383 220 ntBASIC18.86■□□□□ 0.61
MBD3O95983 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.86■□□□□ 0.61
MBD3O95983 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.86■□□□□ 0.61
MBD3O95983 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.86■□□□□ 0.61
MBD3O95983 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.86■□□□□ 0.61
MBD3O95983 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MBD3O95983 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
MBD3O95983 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
MBD3O95983 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
MBD3O95983 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MBD3O95983 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
MBD3O95983 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.86■□□□□ 0.61
MBD3O95983 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.86■□□□□ 0.61
MBD3O95983 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MBD3O95983 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MBD3O95983 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MBD3O95983 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.85■□□□□ 0.61
MBD3O95983 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
MBD3O95983 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
MBD3O95983 AC008677.1-201ENST00000519230 1561 ntBASIC18.85■□□□□ 0.61
MBD3O95983 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.85■□□□□ 0.61
MBD3O95983 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MBD3O95983 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
MBD3O95983 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MBD3O95983 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC18.85■□□□□ 0.61
MBD3O95983 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
MBD3O95983 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MBD3O95983 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
MBD3O95983 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC18.85■□□□□ 0.61
MBD3O95983 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
MBD3O95983 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MBD3O95983 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
MBD3O95983 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.85■□□□□ 0.61
MBD3O95983 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
MBD3O95983 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MBD3O95983 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.85■□□□□ 0.61
MBD3O95983 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
MBD3O95983 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.85■□□□□ 0.61
MBD3O95983 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
MBD3O95983 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MBD3O95983 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MBD3O95983 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MBD3O95983 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
MBD3O95983 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.85■□□□□ 0.61
MBD3O95983 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
MBD3O95983 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.84■□□□□ 0.61
MBD3O95983 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.84■□□□□ 0.61
MBD3O95983 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
MBD3O95983 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
MBD3O95983 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MBD3O95983 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.84■□□□□ 0.61
MBD3O95983 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MBD3O95983 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MBD3O95983 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MBD3O95983 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MBD3O95983 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MBD3O95983 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.84■□□□□ 0.61
MBD3O95983 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
MBD3O95983 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.84■□□□□ 0.61
MBD3O95983 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.84■□□□□ 0.61
MBD3O95983 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MBD3O95983 POM121L3P-201ENST00000419331 1163 ntBASIC18.84■□□□□ 0.61
MBD3O95983 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MBD3O95983 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.84■□□□□ 0.61
MBD3O95983 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.84■□□□□ 0.61
MBD3O95983 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.84■□□□□ 0.61
MBD3O95983 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MBD3O95983 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MBD3O95983 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
MBD3O95983 AP001350.2-201ENST00000625104 1094 ntBASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms