Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.82■□□□□ 0.12
CPNE3O75131 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CPNE3O75131 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPNE3O75131 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.82■□□□□ 0.12
CPNE3O75131 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPNE3O75131 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPNE3O75131 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
CPNE3O75131 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.82■□□□□ 0.12
CPNE3O75131 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CPNE3O75131 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.82■□□□□ 0.12
CPNE3O75131 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CPNE3O75131 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.82■□□□□ 0.12
CPNE3O75131 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPNE3O75131 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.82■□□□□ 0.12
CPNE3O75131 SPDYE7P-202ENST00000420373 878 ntBASIC15.82■□□□□ 0.12
CPNE3O75131 FAM8A3P-201ENST00000427218 844 ntBASIC15.82■□□□□ 0.12
CPNE3O75131 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.82■□□□□ 0.12
CPNE3O75131 GPS2P2-201ENST00000430745 888 ntBASIC15.82■□□□□ 0.12
CPNE3O75131 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.82■□□□□ 0.12
CPNE3O75131 SPCS2P1-201ENST00000561636 679 ntBASIC15.82■□□□□ 0.12
CPNE3O75131 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CPNE3O75131 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.82■□□□□ 0.12
CPNE3O75131 AC084121.4-201ENST00000641598 221 ntBASIC15.82■□□□□ 0.12
CPNE3O75131 AF228730.8-201ENST00000642140 221 ntBASIC15.82■□□□□ 0.12
CPNE3O75131 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.82■□□□□ 0.12
CPNE3O75131 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.82■□□□□ 0.12
CPNE3O75131 LINC02199-201ENST00000506655 2702 ntBASIC15.82■□□□□ 0.12
CPNE3O75131 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CPNE3O75131 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CPNE3O75131 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPNE3O75131 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.82■□□□□ 0.12
CPNE3O75131 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPNE3O75131 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPNE3O75131 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPNE3O75131 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPNE3O75131 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CPNE3O75131 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.82■□□□□ 0.12
CPNE3O75131 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CPNE3O75131 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPNE3O75131 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPNE3O75131 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.82■□□□□ 0.12
CPNE3O75131 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.81■□□□□ 0.12
CPNE3O75131 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPNE3O75131 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPNE3O75131 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPNE3O75131 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CPNE3O75131 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPNE3O75131 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPNE3O75131 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CPNE3O75131 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CPNE3O75131 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CPNE3O75131 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
CPNE3O75131 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPNE3O75131 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.81■□□□□ 0.12
CPNE3O75131 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPNE3O75131 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CPNE3O75131 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPNE3O75131 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.81■□□□□ 0.12
CPNE3O75131 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.81■□□□□ 0.12
CPNE3O75131 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.81■□□□□ 0.12
CPNE3O75131 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPNE3O75131 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.81■□□□□ 0.12
CPNE3O75131 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.81■□□□□ 0.12
CPNE3O75131 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.81■□□□□ 0.12
CPNE3O75131 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.81■□□□□ 0.12
CPNE3O75131 AC069262.1-201ENST00000539058 672 ntBASIC15.81■□□□□ 0.12
CPNE3O75131 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.81■□□□□ 0.12
CPNE3O75131 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CPNE3O75131 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.81■□□□□ 0.12
CPNE3O75131 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.81■□□□□ 0.12
CPNE3O75131 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CPNE3O75131 AC027307.2-201ENST00000591252 911 ntBASIC15.81■□□□□ 0.12
CPNE3O75131 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPNE3O75131 LINC02084-201ENST00000606069 1096 ntBASIC15.81■□□□□ 0.12
CPNE3O75131 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CPNE3O75131 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CPNE3O75131 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.81■□□□□ 0.12
CPNE3O75131 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CPNE3O75131 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPNE3O75131 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CPNE3O75131 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE3O75131 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE3O75131 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE3O75131 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE3O75131 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE3O75131 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.8■□□□□ 0.12
CPNE3O75131 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CPNE3O75131 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE3O75131 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE3O75131 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE3O75131 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
CPNE3O75131 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE3O75131 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CPNE3O75131 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE3O75131 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CPNE3O75131 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE3O75131 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE3O75131 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.8■□□□□ 0.12
CPNE3O75131 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE3O75131 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms