Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PFDN1O60925 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
PFDN1O60925 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC14.66□□□□□ -0.06
PFDN1O60925 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PFDN1O60925 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
PFDN1O60925 AC034236.2-201ENST00000606662 1610 ntBASIC14.66□□□□□ -0.06
PFDN1O60925 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
PFDN1O60925 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PFDN1O60925 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC14.66□□□□□ -0.06
PFDN1O60925 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
PFDN1O60925 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PFDN1O60925 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PFDN1O60925 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PFDN1O60925 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PFDN1O60925 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PFDN1O60925 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
PFDN1O60925 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.66□□□□□ -0.06
PFDN1O60925 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.66□□□□□ -0.06
PFDN1O60925 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
PFDN1O60925 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PFDN1O60925 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PFDN1O60925 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PFDN1O60925 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.66□□□□□ -0.06
PFDN1O60925 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PFDN1O60925 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC14.66□□□□□ -0.06
PFDN1O60925 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PFDN1O60925 MCCD1P1-208ENST00000445732 328 ntBASIC14.66□□□□□ -0.06
PFDN1O60925 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PFDN1O60925 RHOF-204ENST00000537265 699 ntTSL 2 BASIC14.66□□□□□ -0.06
PFDN1O60925 AC005181.1-201ENST00000604782 1256 ntBASIC14.66□□□□□ -0.06
PFDN1O60925 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PFDN1O60925 AL139327.4-201ENST00000612362 153 ntBASIC14.66□□□□□ -0.06
PFDN1O60925 AL136967.2-201ENST00000623968 743 ntBASIC14.66□□□□□ -0.06
PFDN1O60925 AC008694.1-202ENST00000636953 945 ntBASIC14.66□□□□□ -0.06
PFDN1O60925 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.66□□□□□ -0.06
PFDN1O60925 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PFDN1O60925 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PFDN1O60925 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.66□□□□□ -0.06
PFDN1O60925 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PFDN1O60925 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.66□□□□□ -0.06
PFDN1O60925 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PFDN1O60925 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PFDN1O60925 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PFDN1O60925 AJ011931.1-201ENST00000618749 2492 ntBASIC14.66□□□□□ -0.06
PFDN1O60925 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.66□□□□□ -0.06
PFDN1O60925 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PFDN1O60925 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PFDN1O60925 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PFDN1O60925 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PFDN1O60925 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PFDN1O60925 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
PFDN1O60925 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PFDN1O60925 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PFDN1O60925 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
PFDN1O60925 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
PFDN1O60925 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
PFDN1O60925 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PFDN1O60925 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.65□□□□□ -0.06
PFDN1O60925 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PFDN1O60925 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.65□□□□□ -0.06
PFDN1O60925 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PFDN1O60925 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.65□□□□□ -0.06
PFDN1O60925 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PFDN1O60925 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC14.65□□□□□ -0.06
PFDN1O60925 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PFDN1O60925 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PFDN1O60925 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PFDN1O60925 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PFDN1O60925 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC14.65□□□□□ -0.06
PFDN1O60925 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PFDN1O60925 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC14.65□□□□□ -0.06
PFDN1O60925 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC14.65□□□□□ -0.06
PFDN1O60925 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
PFDN1O60925 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.65□□□□□ -0.06
PFDN1O60925 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
PFDN1O60925 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
PFDN1O60925 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PFDN1O60925 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PFDN1O60925 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PFDN1O60925 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
PFDN1O60925 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
PFDN1O60925 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
PFDN1O60925 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
PFDN1O60925 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PFDN1O60925 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.65□□□□□ -0.07
PFDN1O60925 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.07
PFDN1O60925 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC14.64□□□□□ -0.07
PFDN1O60925 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PFDN1O60925 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
PFDN1O60925 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
PFDN1O60925 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
PFDN1O60925 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC14.64□□□□□ -0.07
PFDN1O60925 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.64□□□□□ -0.07
PFDN1O60925 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PFDN1O60925 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.64□□□□□ -0.07
PFDN1O60925 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
PFDN1O60925 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
PFDN1O60925 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PFDN1O60925 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
PFDN1O60925 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms