Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SH2D1AO60880 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC12.34□□□□□ -0.43
SH2D1AO60880 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SH2D1AO60880 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC12.34□□□□□ -0.43
SH2D1AO60880 THAP5-204ENST00000438865 868 ntTSL 2 BASIC12.34□□□□□ -0.43
SH2D1AO60880 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC12.34□□□□□ -0.43
SH2D1AO60880 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SH2D1AO60880 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
SH2D1AO60880 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
SH2D1AO60880 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
SH2D1AO60880 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
SH2D1AO60880 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SH2D1AO60880 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC12.34□□□□□ -0.43
SH2D1AO60880 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SH2D1AO60880 BID-213ENST00000615414 2236 ntTSL 5 BASIC12.34□□□□□ -0.43
SH2D1AO60880 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SH2D1AO60880 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SH2D1AO60880 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SH2D1AO60880 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SH2D1AO60880 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
SH2D1AO60880 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
SH2D1AO60880 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC12.34□□□□□ -0.43
SH2D1AO60880 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SH2D1AO60880 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SH2D1AO60880 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC12.34□□□□□ -0.43
SH2D1AO60880 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC12.33□□□□□ -0.43
SH2D1AO60880 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.43
SH2D1AO60880 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
SH2D1AO60880 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SH2D1AO60880 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SH2D1AO60880 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SH2D1AO60880 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SH2D1AO60880 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SH2D1AO60880 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SH2D1AO60880 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SH2D1AO60880 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SH2D1AO60880 AC016734.2-201ENST00000624325 1377 ntBASIC12.33□□□□□ -0.44
SH2D1AO60880 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.33□□□□□ -0.44
SH2D1AO60880 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SH2D1AO60880 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SH2D1AO60880 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
SH2D1AO60880 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
SH2D1AO60880 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC12.33□□□□□ -0.44
SH2D1AO60880 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.33□□□□□ -0.44
SH2D1AO60880 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC12.33□□□□□ -0.44
SH2D1AO60880 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC12.33□□□□□ -0.44
SH2D1AO60880 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SH2D1AO60880 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.33□□□□□ -0.44
SH2D1AO60880 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SH2D1AO60880 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SH2D1AO60880 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SH2D1AO60880 PPIH-202ENST00000372549 327 ntTSL 3 BASIC12.33□□□□□ -0.44
SH2D1AO60880 MIR648-201ENST00000385046 94 ntBASIC12.33□□□□□ -0.44
SH2D1AO60880 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC12.33□□□□□ -0.44
SH2D1AO60880 ABCD1P5-201ENST00000445663 754 ntBASIC12.33□□□□□ -0.44
SH2D1AO60880 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC12.33□□□□□ -0.44
SH2D1AO60880 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SH2D1AO60880 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC12.33□□□□□ -0.44
SH2D1AO60880 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC12.33□□□□□ -0.44
SH2D1AO60880 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC12.33□□□□□ -0.44
SH2D1AO60880 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SH2D1AO60880 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SH2D1AO60880 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC12.33□□□□□ -0.44
SH2D1AO60880 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
SH2D1AO60880 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
SH2D1AO60880 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SH2D1AO60880 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SH2D1AO60880 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SH2D1AO60880 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
SH2D1AO60880 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SH2D1AO60880 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SH2D1AO60880 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SH2D1AO60880 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SH2D1AO60880 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SH2D1AO60880 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SH2D1AO60880 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SH2D1AO60880 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC12.33□□□□□ -0.44
SH2D1AO60880 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SH2D1AO60880 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC12.33□□□□□ -0.44
SH2D1AO60880 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SH2D1AO60880 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SH2D1AO60880 PPT1-215ENST00000641471 2368 ntBASIC12.33□□□□□ -0.44
SH2D1AO60880 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SH2D1AO60880 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SH2D1AO60880 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
SH2D1AO60880 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SH2D1AO60880 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
SH2D1AO60880 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SH2D1AO60880 AC006058.4-201ENST00000624016 1670 ntBASIC12.32□□□□□ -0.44
SH2D1AO60880 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.32□□□□□ -0.44
SH2D1AO60880 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SH2D1AO60880 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
SH2D1AO60880 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC12.32□□□□□ -0.44
SH2D1AO60880 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SH2D1AO60880 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SH2D1AO60880 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SH2D1AO60880 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SH2D1AO60880 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC12.32□□□□□ -0.44
SH2D1AO60880 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SH2D1AO60880 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms