Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN1O15353 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.54■□□□□ 0.72
FOXN1O15353 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
FOXN1O15353 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN1O15353 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN1O15353 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN1O15353 AP3S2-216ENST00000617003 1561 ntBASIC19.54■□□□□ 0.72
FOXN1O15353 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN1O15353 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN1O15353 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.54■□□□□ 0.72
FOXN1O15353 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN1O15353 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN1O15353 NSL1-201ENST00000366976 722 ntTSL 2 BASIC19.54■□□□□ 0.72
FOXN1O15353 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN1O15353 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
FOXN1O15353 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN1O15353 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC19.54■□□□□ 0.72
FOXN1O15353 RPL37AP1-201ENST00000412502 279 ntBASIC19.54■□□□□ 0.72
FOXN1O15353 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
FOXN1O15353 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC19.54■□□□□ 0.72
FOXN1O15353 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN1O15353 CTBP2P3-201ENST00000585629 1255 ntBASIC19.54■□□□□ 0.72
FOXN1O15353 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.54■□□□□ 0.72
FOXN1O15353 RPS24-214ENST00000613865 538 ntTSL 5 BASIC19.54■□□□□ 0.72
FOXN1O15353 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN1O15353 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN1O15353 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN1O15353 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
FOXN1O15353 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
FOXN1O15353 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
FOXN1O15353 SLC7A15P-201ENST00000424028 1363 ntBASIC19.54■□□□□ 0.72
FOXN1O15353 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FOXN1O15353 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC19.54■□□□□ 0.72
FOXN1O15353 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.54■□□□□ 0.72
FOXN1O15353 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.54■□□□□ 0.72
FOXN1O15353 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN1O15353 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN1O15353 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN1O15353 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
FOXN1O15353 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
FOXN1O15353 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN1O15353 RNF216P1-203ENST00000404404 2427 ntBASIC19.53■□□□□ 0.72
FOXN1O15353 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN1O15353 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN1O15353 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN1O15353 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN1O15353 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
FOXN1O15353 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
FOXN1O15353 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
FOXN1O15353 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN1O15353 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN1O15353 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN1O15353 FXNP2-201ENST00000411625 547 ntBASIC19.53■□□□□ 0.72
FOXN1O15353 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.53■□□□□ 0.72
FOXN1O15353 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
FOXN1O15353 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN1O15353 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC19.53■□□□□ 0.72
FOXN1O15353 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
FOXN1O15353 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.53■□□□□ 0.72
FOXN1O15353 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
FOXN1O15353 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN1O15353 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
FOXN1O15353 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN1O15353 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.53■□□□□ 0.72
FOXN1O15353 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN1O15353 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXN1O15353 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.52■□□□□ 0.72
FOXN1O15353 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXN1O15353 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXN1O15353 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.52■□□□□ 0.72
FOXN1O15353 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXN1O15353 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXN1O15353 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
FOXN1O15353 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
FOXN1O15353 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
FOXN1O15353 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXN1O15353 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
FOXN1O15353 MIR1247-201ENST00000408206 136 ntBASIC19.52■□□□□ 0.72
FOXN1O15353 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
FOXN1O15353 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXN1O15353 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC19.52■□□□□ 0.72
FOXN1O15353 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
FOXN1O15353 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC19.52■□□□□ 0.72
FOXN1O15353 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXN1O15353 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
FOXN1O15353 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXN1O15353 AC092068.3-201ENST00000587894 2016 ntBASIC19.52■□□□□ 0.72
FOXN1O15353 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXN1O15353 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
FOXN1O15353 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
FOXN1O15353 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
FOXN1O15353 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
FOXN1O15353 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.52■□□□□ 0.71
FOXN1O15353 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
FOXN1O15353 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
FOXN1O15353 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN1O15353 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN1O15353 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.51■□□□□ 0.71
FOXN1O15353 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN1O15353 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms