Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
PCDH17O14917 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
PCDH17O14917 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH17O14917 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH17O14917 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH17O14917 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
PCDH17O14917 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDH17O14917 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.72■□□□□ 0.11
PCDH17O14917 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDH17O14917 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDH17O14917 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PCDH17O14917 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
PCDH17O14917 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDH17O14917 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH17O14917 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PCDH17O14917 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.71■□□□□ 0.11
PCDH17O14917 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH17O14917 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH17O14917 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH17O14917 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDH17O14917 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.71■□□□□ 0.11
PCDH17O14917 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH17O14917 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.71■□□□□ 0.11
PCDH17O14917 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH17O14917 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH17O14917 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH17O14917 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.71■□□□□ 0.11
PCDH17O14917 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH17O14917 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH17O14917 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PCDH17O14917 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PCDH17O14917 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
PCDH17O14917 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH17O14917 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
PCDH17O14917 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH17O14917 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH17O14917 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.71■□□□□ 0.11
PCDH17O14917 RNU1-129P-201ENST00000384064 167 ntBASIC15.71■□□□□ 0.11
PCDH17O14917 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
PCDH17O14917 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH17O14917 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH17O14917 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
PCDH17O14917 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PCDH17O14917 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.71■□□□□ 0.11
PCDH17O14917 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.71■□□□□ 0.11
PCDH17O14917 U1.21-201ENST00000580816 167 ntBASIC15.71■□□□□ 0.11
PCDH17O14917 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH17O14917 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.71■□□□□ 0.11
PCDH17O14917 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.71■□□□□ 0.11
PCDH17O14917 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH17O14917 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH17O14917 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDH17O14917 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PCDH17O14917 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
PCDH17O14917 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH17O14917 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDH17O14917 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.71■□□□□ 0.11
PCDH17O14917 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PCDH17O14917 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.1
PCDH17O14917 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.71■□□□□ 0.1
PCDH17O14917 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
PCDH17O14917 AC007950.2-201ENST00000615045 2347 ntBASIC15.71■□□□□ 0.1
PCDH17O14917 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PCDH17O14917 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PCDH17O14917 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
PCDH17O14917 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDH17O14917 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH17O14917 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDH17O14917 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH17O14917 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH17O14917 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH17O14917 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH17O14917 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
PCDH17O14917 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDH17O14917 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH17O14917 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH17O14917 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
PCDH17O14917 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH17O14917 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH17O14917 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH17O14917 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PCDH17O14917 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDH17O14917 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
PCDH17O14917 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH17O14917 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH17O14917 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH17O14917 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH17O14917 AC092919.2-201ENST00000623631 1645 ntBASIC15.7■□□□□ 0.1
PCDH17O14917 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH17O14917 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH17O14917 AC092474.2-201ENST00000424288 719 ntBASIC15.7■□□□□ 0.1
PCDH17O14917 SPDYE11-202ENST00000450699 704 ntBASIC15.7■□□□□ 0.1
PCDH17O14917 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDH17O14917 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PCDH17O14917 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.7■□□□□ 0.1
PCDH17O14917 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.7■□□□□ 0.1
PCDH17O14917 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDH17O14917 SPDYE9P-201ENST00000570642 692 ntBASIC15.7■□□□□ 0.1
PCDH17O14917 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH17O14917 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms