Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK2O00526 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
UPK2O00526 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK2O00526 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK2O00526 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK2O00526 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC13.2□□□□□ -0.3
UPK2O00526 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
UPK2O00526 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
UPK2O00526 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC13.2□□□□□ -0.3
UPK2O00526 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UPK2O00526 PRSS29P-201ENST00000440800 595 ntBASIC13.2□□□□□ -0.3
UPK2O00526 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.2□□□□□ -0.3
UPK2O00526 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC13.2□□□□□ -0.3
UPK2O00526 LINC02447-202ENST00000501888 2146 ntBASIC13.2□□□□□ -0.3
UPK2O00526 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
UPK2O00526 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UPK2O00526 AL031055.1-201ENST00000606362 631 ntBASIC13.2□□□□□ -0.3
UPK2O00526 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
UPK2O00526 AC148477.8-201ENST00000624298 468 ntBASIC13.2□□□□□ -0.3
UPK2O00526 AC117500.6-201ENST00000624871 588 ntBASIC13.2□□□□□ -0.3
UPK2O00526 FAM215A-202ENST00000632077 792 ntBASIC13.2□□□□□ -0.3
UPK2O00526 VPS51-217ENST00000639871 243 ntTSL 5 BASIC13.2□□□□□ -0.3
UPK2O00526 AL645728.2-201ENST00000641974 660 ntBASIC13.2□□□□□ -0.3
UPK2O00526 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK2O00526 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK2O00526 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK2O00526 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.2□□□□□ -0.3
UPK2O00526 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.2□□□□□ -0.3
UPK2O00526 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
UPK2O00526 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
UPK2O00526 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.2□□□□□ -0.3
UPK2O00526 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.2□□□□□ -0.3
UPK2O00526 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK2O00526 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.2□□□□□ -0.3
UPK2O00526 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK2O00526 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK2O00526 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK2O00526 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UPK2O00526 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK2O00526 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UPK2O00526 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
UPK2O00526 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.19□□□□□ -0.3
UPK2O00526 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
UPK2O00526 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UPK2O00526 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK2O00526 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK2O00526 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK2O00526 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK2O00526 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UPK2O00526 U82695.1-201ENST00000635752 1889 ntBASIC13.19□□□□□ -0.3
UPK2O00526 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK2O00526 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.19□□□□□ -0.3
UPK2O00526 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
UPK2O00526 AC112504.1-201ENST00000623415 1841 ntBASIC13.19□□□□□ -0.3
UPK2O00526 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
UPK2O00526 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK2O00526 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
UPK2O00526 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.19□□□□□ -0.3
UPK2O00526 PMS2P4-201ENST00000412466 1052 ntBASIC13.19□□□□□ -0.3
UPK2O00526 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC13.19□□□□□ -0.3
UPK2O00526 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.19□□□□□ -0.3
UPK2O00526 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
UPK2O00526 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC13.19□□□□□ -0.3
UPK2O00526 AL031432.2-201ENST00000566714 459 ntBASIC13.19□□□□□ -0.3
UPK2O00526 AL928711.1-201ENST00000570165 459 ntBASIC13.19□□□□□ -0.3
UPK2O00526 MIR4751-201ENST00000578027 74 ntBASIC13.19□□□□□ -0.3
UPK2O00526 MIR3909-201ENST00000579518 119 ntBASIC13.19□□□□□ -0.3
UPK2O00526 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.19□□□□□ -0.3
UPK2O00526 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
UPK2O00526 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.19□□□□□ -0.3
UPK2O00526 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
UPK2O00526 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.19□□□□□ -0.3
UPK2O00526 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK2O00526 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK2O00526 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK2O00526 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK2O00526 AC069224.1-201ENST00000566372 1715 ntBASIC13.19□□□□□ -0.3
UPK2O00526 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.19□□□□□ -0.3
UPK2O00526 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK2O00526 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC13.19□□□□□ -0.3
UPK2O00526 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.19□□□□□ -0.3
UPK2O00526 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK2O00526 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
UPK2O00526 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
UPK2O00526 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UPK2O00526 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UPK2O00526 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.18□□□□□ -0.3
UPK2O00526 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UPK2O00526 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.18□□□□□ -0.3
UPK2O00526 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UPK2O00526 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UPK2O00526 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UPK2O00526 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UPK2O00526 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UPK2O00526 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
UPK2O00526 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UPK2O00526 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UPK2O00526 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.18□□□□□ -0.3
UPK2O00526 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
UPK2O00526 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms