Protein–RNA interactions for Protein: O00221

NFKBIE, NF-kappa-B inhibitor epsilon, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIEO00221 AC005695.3-201ENST00000614522 232 ntBASIC19.49■□□□□ 0.71
NFKBIEO00221 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NFKBIEO00221 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
NFKBIEO00221 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NFKBIEO00221 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NFKBIEO00221 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
NFKBIEO00221 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NFKBIEO00221 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NFKBIEO00221 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NFKBIEO00221 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.49■□□□□ 0.71
NFKBIEO00221 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NFKBIEO00221 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NFKBIEO00221 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NFKBIEO00221 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NFKBIEO00221 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
NFKBIEO00221 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NFKBIEO00221 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
NFKBIEO00221 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NFKBIEO00221 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
NFKBIEO00221 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NFKBIEO00221 ELP6-209ENST00000446787 894 ntTSL 3 BASIC19.48■□□□□ 0.71
NFKBIEO00221 Z93015.1-201ENST00000451718 390 ntBASIC19.48■□□□□ 0.71
NFKBIEO00221 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NFKBIEO00221 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NFKBIEO00221 KC6-205ENST00000599934 556 ntTSL 4 BASIC19.48■□□□□ 0.71
NFKBIEO00221 LARP4-220ENST00000615080 856 ntTSL 5 BASIC19.48■□□□□ 0.71
NFKBIEO00221 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC19.48■□□□□ 0.71
NFKBIEO00221 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NFKBIEO00221 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
NFKBIEO00221 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NFKBIEO00221 KRT8P37-201ENST00000451609 1420 ntBASIC19.48■□□□□ 0.71
NFKBIEO00221 AL691432.1-201ENST00000596308 1422 ntBASIC19.48■□□□□ 0.71
NFKBIEO00221 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NFKBIEO00221 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
NFKBIEO00221 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.48■□□□□ 0.71
NFKBIEO00221 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC19.48■□□□□ 0.71
NFKBIEO00221 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC19.48■□□□□ 0.71
NFKBIEO00221 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
NFKBIEO00221 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NFKBIEO00221 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
NFKBIEO00221 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NFKBIEO00221 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC19.47■□□□□ 0.71
NFKBIEO00221 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NFKBIEO00221 RPS3-201ENST00000278572 907 ntTSL 3 BASIC19.47■□□□□ 0.71
NFKBIEO00221 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NFKBIEO00221 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NFKBIEO00221 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NFKBIEO00221 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC19.47■□□□□ 0.71
NFKBIEO00221 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC19.47■□□□□ 0.71
NFKBIEO00221 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC19.47■□□□□ 0.71
NFKBIEO00221 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.47■□□□□ 0.71
NFKBIEO00221 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC19.47■□□□□ 0.71
NFKBIEO00221 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC19.47■□□□□ 0.71
NFKBIEO00221 AC244452.3-201ENST00000636814 210 ntBASIC19.47■□□□□ 0.71
NFKBIEO00221 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
NFKBIEO00221 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NFKBIEO00221 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NFKBIEO00221 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC19.47■□□□□ 0.71
NFKBIEO00221 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NFKBIEO00221 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NFKBIEO00221 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.47■□□□□ 0.71
NFKBIEO00221 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
NFKBIEO00221 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NFKBIEO00221 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
NFKBIEO00221 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NFKBIEO00221 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NFKBIEO00221 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC19.46■□□□□ 0.71
NFKBIEO00221 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
NFKBIEO00221 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NFKBIEO00221 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC19.46■□□□□ 0.71
NFKBIEO00221 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.46■□□□□ 0.71
NFKBIEO00221 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC19.46■□□□□ 0.71
NFKBIEO00221 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.46■□□□□ 0.71
NFKBIEO00221 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
NFKBIEO00221 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NFKBIEO00221 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NFKBIEO00221 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NFKBIEO00221 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NFKBIEO00221 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
NFKBIEO00221 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NFKBIEO00221 AC004987.2-201ENST00000395959 1148 ntBASIC19.46■□□□□ 0.71
NFKBIEO00221 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC19.46■□□□□ 0.71
NFKBIEO00221 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC19.46■□□□□ 0.71
NFKBIEO00221 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC19.46■□□□□ 0.71
NFKBIEO00221 AC023310.1-201ENST00000554836 735 ntBASIC19.46■□□□□ 0.71
NFKBIEO00221 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
NFKBIEO00221 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC19.46■□□□□ 0.71
NFKBIEO00221 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC19.46■□□□□ 0.71
NFKBIEO00221 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC19.46■□□□□ 0.71
NFKBIEO00221 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.46■□□□□ 0.71
NFKBIEO00221 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NFKBIEO00221 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NFKBIEO00221 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NFKBIEO00221 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
NFKBIEO00221 GRN-222ENST00000639447 1314 ntTSL 2 BASIC19.46■□□□□ 0.71
NFKBIEO00221 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NFKBIEO00221 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NFKBIEO00221 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.46■□□□□ 0.71
NFKBIEO00221 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.45■□□□□ 0.7
NFKBIEO00221 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms