Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX39AO00148 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX39AO00148 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX39AO00148 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
DDX39AO00148 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX39AO00148 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX39AO00148 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX39AO00148 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
DDX39AO00148 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
DDX39AO00148 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
DDX39AO00148 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.44■□□□□ 0.54
DDX39AO00148 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
DDX39AO00148 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
DDX39AO00148 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
DDX39AO00148 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
DDX39AO00148 FO538757.1-201ENST00000623083 1397 ntBASIC18.44■□□□□ 0.54
DDX39AO00148 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
DDX39AO00148 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.44■□□□□ 0.54
DDX39AO00148 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
DDX39AO00148 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
DDX39AO00148 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.44■□□□□ 0.54
DDX39AO00148 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.44■□□□□ 0.54
DDX39AO00148 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
DDX39AO00148 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
DDX39AO00148 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.44■□□□□ 0.54
DDX39AO00148 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.44■□□□□ 0.54
DDX39AO00148 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.44■□□□□ 0.54
DDX39AO00148 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.44■□□□□ 0.54
DDX39AO00148 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
DDX39AO00148 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
DDX39AO00148 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
DDX39AO00148 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.44■□□□□ 0.54
DDX39AO00148 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.44■□□□□ 0.54
DDX39AO00148 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
DDX39AO00148 AC093214.1-201ENST00000511688 1107 ntBASIC18.44■□□□□ 0.54
DDX39AO00148 IGHV3-42-201ENST00000520410 361 ntBASIC18.44■□□□□ 0.54
DDX39AO00148 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.44■□□□□ 0.54
DDX39AO00148 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.44■□□□□ 0.54
DDX39AO00148 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
DDX39AO00148 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.44■□□□□ 0.54
DDX39AO00148 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
DDX39AO00148 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.44■□□□□ 0.54
DDX39AO00148 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.44■□□□□ 0.54
DDX39AO00148 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
DDX39AO00148 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.44■□□□□ 0.54
DDX39AO00148 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
DDX39AO00148 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
DDX39AO00148 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
DDX39AO00148 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX39AO00148 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.43■□□□□ 0.54
DDX39AO00148 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.43■□□□□ 0.54
DDX39AO00148 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
DDX39AO00148 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.43■□□□□ 0.54
DDX39AO00148 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX39AO00148 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX39AO00148 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX39AO00148 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.43■□□□□ 0.54
DDX39AO00148 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
DDX39AO00148 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
DDX39AO00148 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX39AO00148 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
DDX39AO00148 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.43■□□□□ 0.54
DDX39AO00148 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX39AO00148 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.43■□□□□ 0.54
DDX39AO00148 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.43■□□□□ 0.54
DDX39AO00148 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.43■□□□□ 0.54
DDX39AO00148 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
DDX39AO00148 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX39AO00148 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX39AO00148 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX39AO00148 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX39AO00148 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
DDX39AO00148 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX39AO00148 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
DDX39AO00148 AL589702.1-201ENST00000641229 1509 ntBASIC18.43■□□□□ 0.54
DDX39AO00148 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX39AO00148 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
DDX39AO00148 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX39AO00148 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
DDX39AO00148 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
DDX39AO00148 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX39AO00148 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX39AO00148 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX39AO00148 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.42■□□□□ 0.54
DDX39AO00148 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.42■□□□□ 0.54
DDX39AO00148 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.42■□□□□ 0.54
DDX39AO00148 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.42■□□□□ 0.54
DDX39AO00148 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
DDX39AO00148 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
DDX39AO00148 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.42■□□□□ 0.54
DDX39AO00148 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
DDX39AO00148 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX39AO00148 FAM220BP-201ENST00000377689 816 ntBASIC18.42■□□□□ 0.54
DDX39AO00148 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
DDX39AO00148 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
DDX39AO00148 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.42■□□□□ 0.54
DDX39AO00148 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.42■□□□□ 0.54
DDX39AO00148 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX39AO00148 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.42■□□□□ 0.54
DDX39AO00148 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms