Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP17L11C9JVI0 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.96■□□□□ 0.63
USP17L11C9JVI0 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
USP17L11C9JVI0 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.96■□□□□ 0.63
USP17L11C9JVI0 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP17L11C9JVI0 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP17L11C9JVI0 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
USP17L11C9JVI0 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.96■□□□□ 0.63
USP17L11C9JVI0 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP17L11C9JVI0 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP17L11C9JVI0 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP17L11C9JVI0 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
USP17L11C9JVI0 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USP17L11C9JVI0 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USP17L11C9JVI0 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP17L11C9JVI0 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP17L11C9JVI0 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.95■□□□□ 0.62
USP17L11C9JVI0 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP17L11C9JVI0 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.95■□□□□ 0.62
USP17L11C9JVI0 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP17L11C9JVI0 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP17L11C9JVI0 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP17L11C9JVI0 HLA-A-202ENST00000376806 1854 ntBASIC18.95■□□□□ 0.62
USP17L11C9JVI0 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
USP17L11C9JVI0 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP17L11C9JVI0 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.95■□□□□ 0.62
USP17L11C9JVI0 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.95■□□□□ 0.62
USP17L11C9JVI0 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP17L11C9JVI0 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP17L11C9JVI0 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP17L11C9JVI0 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.95■□□□□ 0.62
USP17L11C9JVI0 KRT17P7-201ENST00000451704 1104 ntBASIC18.95■□□□□ 0.62
USP17L11C9JVI0 AC010336.2-201ENST00000564226 506 ntBASIC18.95■□□□□ 0.62
USP17L11C9JVI0 AC140912.1-201ENST00000577171 1054 ntBASIC18.95■□□□□ 0.62
USP17L11C9JVI0 AC061975.2-201ENST00000581722 295 ntBASIC18.95■□□□□ 0.62
USP17L11C9JVI0 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.95■□□□□ 0.62
USP17L11C9JVI0 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.95■□□□□ 0.62
USP17L11C9JVI0 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP17L11C9JVI0 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP17L11C9JVI0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.95■□□□□ 0.62
USP17L11C9JVI0 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.95■□□□□ 0.62
USP17L11C9JVI0 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.95■□□□□ 0.62
USP17L11C9JVI0 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP17L11C9JVI0 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
USP17L11C9JVI0 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.94■□□□□ 0.62
USP17L11C9JVI0 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
USP17L11C9JVI0 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.94■□□□□ 0.62
USP17L11C9JVI0 AGGF1P2-201ENST00000426656 2106 ntBASIC18.94■□□□□ 0.62
USP17L11C9JVI0 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
USP17L11C9JVI0 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.94■□□□□ 0.62
USP17L11C9JVI0 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
USP17L11C9JVI0 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP17L11C9JVI0 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP17L11C9JVI0 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.94■□□□□ 0.62
USP17L11C9JVI0 GNAQP1-201ENST00000444815 1067 ntBASIC18.94■□□□□ 0.62
USP17L11C9JVI0 MEIS3P1-201ENST00000495167 958 ntBASIC18.94■□□□□ 0.62
USP17L11C9JVI0 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
USP17L11C9JVI0 AL512361.1-201ENST00000554200 418 ntBASIC18.94■□□□□ 0.62
USP17L11C9JVI0 AC026979.3-201ENST00000607315 403 ntBASIC18.94■□□□□ 0.62
USP17L11C9JVI0 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
USP17L11C9JVI0 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP17L11C9JVI0 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP17L11C9JVI0 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP17L11C9JVI0 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.94■□□□□ 0.62
USP17L11C9JVI0 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
USP17L11C9JVI0 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
USP17L11C9JVI0 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP17L11C9JVI0 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
USP17L11C9JVI0 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.94■□□□□ 0.62
USP17L11C9JVI0 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP17L11C9JVI0 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
USP17L11C9JVI0 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
USP17L11C9JVI0 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.93■□□□□ 0.62
USP17L11C9JVI0 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
USP17L11C9JVI0 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP17L11C9JVI0 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
USP17L11C9JVI0 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
USP17L11C9JVI0 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
USP17L11C9JVI0 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP17L11C9JVI0 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
USP17L11C9JVI0 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP17L11C9JVI0 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
USP17L11C9JVI0 DFFBP1-201ENST00000433250 979 ntBASIC18.93■□□□□ 0.62
USP17L11C9JVI0 SERBP1P3-201ENST00000459980 809 ntBASIC18.93■□□□□ 0.62
USP17L11C9JVI0 AC104794.3-201ENST00000566840 1248 ntBASIC18.93■□□□□ 0.62
USP17L11C9JVI0 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
USP17L11C9JVI0 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.93■□□□□ 0.62
USP17L11C9JVI0 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.93■□□□□ 0.62
USP17L11C9JVI0 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP17L11C9JVI0 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.93■□□□□ 0.62
USP17L11C9JVI0 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP17L11C9JVI0 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP17L11C9JVI0 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
USP17L11C9JVI0 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP17L11C9JVI0 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.93■□□□□ 0.62
USP17L11C9JVI0 GPAA1P2-202ENST00000606848 1787 ntBASIC18.93■□□□□ 0.62
USP17L11C9JVI0 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.93■□□□□ 0.62
USP17L11C9JVI0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
USP17L11C9JVI0 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP17L11C9JVI0 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms