Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.61■□□□□ 0.25
TBC1D3BA6NDS4 RN7SL692P-201ENST00000464677 288 ntBASIC16.61■□□□□ 0.25
TBC1D3BA6NDS4 HLA-J-202ENST00000469281 1241 ntBASIC16.61■□□□□ 0.25
TBC1D3BA6NDS4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.61■□□□□ 0.25
TBC1D3BA6NDS4 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.61■□□□□ 0.25
TBC1D3BA6NDS4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TBC1D3BA6NDS4 AL596325.1-201ENST00000563991 1082 ntBASIC16.61■□□□□ 0.25
TBC1D3BA6NDS4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.61■□□□□ 0.25
TBC1D3BA6NDS4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
TBC1D3BA6NDS4 AC061975.2-201ENST00000581722 295 ntBASIC16.61■□□□□ 0.25
TBC1D3BA6NDS4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.61■□□□□ 0.25
TBC1D3BA6NDS4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TBC1D3BA6NDS4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.61■□□□□ 0.25
TBC1D3BA6NDS4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TBC1D3BA6NDS4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.61■□□□□ 0.25
TBC1D3BA6NDS4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
TBC1D3BA6NDS4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TBC1D3BA6NDS4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TBC1D3BA6NDS4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TBC1D3BA6NDS4 PCGF3-213ENST00000620529 1899 ntBASIC16.61■□□□□ 0.25
TBC1D3BA6NDS4 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TBC1D3BA6NDS4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TBC1D3BA6NDS4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 GK-202ENST00000378941 458 ntTSL 3 BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 SERBP1P3-201ENST00000459980 809 ntBASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 AC004840.1-201ENST00000636359 365 ntBASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 BTBD7P1-201ENST00000447253 1453 ntBASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 AL645608.8-201ENST00000606034 2086 ntBASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3BA6NDS4 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 AC005915.1-201ENST00000624912 2018 ntBASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 NME2P1-201ENST00000426182 414 ntBASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 AL353779.1-201ENST00000434793 351 ntBASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 CR383656.12-201ENST00000549567 513 ntBASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 AL132655.2-201ENST00000596276 594 ntBASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TBC1D3BA6NDS4 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms