Protein–RNA interactions for Protein: A1X283

SH3PXD2B, SH3 and PX domain-containing protein 2B, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2BA1X283 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 AC099336.1-202ENST00000602961 463 ntBASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 AC243591.1-201ENST00000452967 1364 ntBASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
SH3PXD2BA1X283 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.06
SH3PXD2BA1X283 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
SH3PXD2BA1X283 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
SH3PXD2BA1X283 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
SH3PXD2BA1X283 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.46■□□□□ 0.06
SH3PXD2BA1X283 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 AC005089.1-201ENST00000619486 2241 ntBASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 POM121L3P-201ENST00000419331 1163 ntBASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 AC012615.1-201ENST00000565797 1299 ntBASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 TERC-201ENST00000602385 541 ntBASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
SH3PXD2BA1X283 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SH3PXD2BA1X283 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SH3PXD2BA1X283 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SH3PXD2BA1X283 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SH3PXD2BA1X283 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.44■□□□□ 0.06
SH3PXD2BA1X283 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SH3PXD2BA1X283 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
SH3PXD2BA1X283 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SH3PXD2BA1X283 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
SH3PXD2BA1X283 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms