Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TCRBV9S1A1TA0A576 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TCRBV9S1A1TA0A576 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TCRBV9S1A1TA0A576 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TCRBV9S1A1TA0A576 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TCRBV9S1A1TA0A576 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
TCRBV9S1A1TA0A576 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.55■□□□□ 0.24
TCRBV9S1A1TA0A576 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.55■□□□□ 0.24
TCRBV9S1A1TA0A576 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.55■□□□□ 0.24
TCRBV9S1A1TA0A576 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TCRBV9S1A1TA0A576 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.55■□□□□ 0.24
TCRBV9S1A1TA0A576 AL356488.2-201ENST00000602755 427 ntBASIC16.55■□□□□ 0.24
TCRBV9S1A1TA0A576 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.55■□□□□ 0.24
TCRBV9S1A1TA0A576 ACTL9-202ENST00000612068 1252 ntBASIC16.55■□□□□ 0.24
TCRBV9S1A1TA0A576 AC008735.5-201ENST00000623544 497 ntBASIC16.55■□□□□ 0.24
TCRBV9S1A1TA0A576 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.55■□□□□ 0.24
TCRBV9S1A1TA0A576 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
TCRBV9S1A1TA0A576 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TCRBV9S1A1TA0A576 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.55■□□□□ 0.24
TCRBV9S1A1TA0A576 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TCRBV9S1A1TA0A576 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TCRBV9S1A1TA0A576 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.55■□□□□ 0.24
TCRBV9S1A1TA0A576 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.55■□□□□ 0.24
TCRBV9S1A1TA0A576 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TCRBV9S1A1TA0A576 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.55■□□□□ 0.24
TCRBV9S1A1TA0A576 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 MIR1199-201ENST00000621445 119 ntBASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TCRBV9S1A1TA0A576 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV9S1A1TA0A576 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV9S1A1TA0A576 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV9S1A1TA0A576 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV9S1A1TA0A576 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV9S1A1TA0A576 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV9S1A1TA0A576 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV9S1A1TA0A576 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV9S1A1TA0A576 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV9S1A1TA0A576 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV9S1A1TA0A576 U82695.1-201ENST00000635752 1889 ntBASIC16.53■□□□□ 0.24
TCRBV9S1A1TA0A576 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.53■□□□□ 0.24
TCRBV9S1A1TA0A576 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV9S1A1TA0A576 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.53■□□□□ 0.24
TCRBV9S1A1TA0A576 RNU1-129P-201ENST00000384064 167 ntBASIC16.53■□□□□ 0.24
TCRBV9S1A1TA0A576 MRPL20P1-201ENST00000400819 433 ntBASIC16.53■□□□□ 0.24
TCRBV9S1A1TA0A576 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
TCRBV9S1A1TA0A576 RNPS1P1-201ENST00000507437 918 ntBASIC16.53■□□□□ 0.24
TCRBV9S1A1TA0A576 AC073648.2-201ENST00000510116 352 ntBASIC16.53■□□□□ 0.24
TCRBV9S1A1TA0A576 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.53■□□□□ 0.24
TCRBV9S1A1TA0A576 U1.21-201ENST00000580816 167 ntBASIC16.53■□□□□ 0.24
TCRBV9S1A1TA0A576 MIR4515-201ENST00000584082 81 ntBASIC16.53■□□□□ 0.24
TCRBV9S1A1TA0A576 CLEC4GP1-201ENST00000596555 870 ntBASIC16.53■□□□□ 0.24
TCRBV9S1A1TA0A576 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV9S1A1TA0A576 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV9S1A1TA0A576 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TCRBV9S1A1TA0A576 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV9S1A1TA0A576 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV9S1A1TA0A576 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV9S1A1TA0A576 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.53■□□□□ 0.24
TCRBV9S1A1TA0A576 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms