Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 RNA5SP415-201ENST00000517246 115 ntBASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 UNC93B6-202ENST00000528242 690 ntBASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 CIPC-205ENST00000555437 566 ntTSL 3 BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 SLC25A6P4-201ENST00000586535 553 ntBASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 AC006449.5-201ENST00000610658 2098 ntBASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 AL031731.1-201ENST00000642131 2094 ntBASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
TRGV1A0A0A0MS02 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 AL512652.2-201ENST00000625156 1716 ntBASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 AC008741.2-201ENST00000612792 3115 ntBASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 VN2R19P-201ENST00000442399 1052 ntBASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 SLC9A3P2-201ENST00000447821 2021 ntBASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 SNX33P1-201ENST00000592116 1762 ntBASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 GGT3P-204ENST00000453783 1664 ntBASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRGV1A0A0A0MS02 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TRGV1A0A0A0MS02 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms