Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA3Q9Y5H8 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.17■□□□□ 0.34
PCDHA3Q9Y5H8 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHA3Q9Y5H8 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHA3Q9Y5H8 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHA3Q9Y5H8 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHA3Q9Y5H8 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA3Q9Y5H8 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDHA3Q9Y5H8 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDHA3Q9Y5H8 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHA3Q9Y5H8 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDHA3Q9Y5H8 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA3Q9Y5H8 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
PCDHA3Q9Y5H8 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA3Q9Y5H8 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PCDHA3Q9Y5H8 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA3Q9Y5H8 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA3Q9Y5H8 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHA3Q9Y5H8 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
PCDHA3Q9Y5H8 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA3Q9Y5H8 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA3Q9Y5H8 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHA3Q9Y5H8 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA3Q9Y5H8 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHA3Q9Y5H8 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHA3Q9Y5H8 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHA3Q9Y5H8 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHA3Q9Y5H8 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
PCDHA3Q9Y5H8 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHA3Q9Y5H8 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHA3Q9Y5H8 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.16■□□□□ 0.34
PCDHA3Q9Y5H8 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHA3Q9Y5H8 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
PCDHA3Q9Y5H8 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.16■□□□□ 0.34
PCDHA3Q9Y5H8 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHA3Q9Y5H8 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHA3Q9Y5H8 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHA3Q9Y5H8 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
PCDHA3Q9Y5H8 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.16■□□□□ 0.34
PCDHA3Q9Y5H8 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.16■□□□□ 0.34
PCDHA3Q9Y5H8 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHA3Q9Y5H8 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.16■□□□□ 0.34
PCDHA3Q9Y5H8 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHA3Q9Y5H8 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHA3Q9Y5H8 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHA3Q9Y5H8 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHA3Q9Y5H8 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHA3Q9Y5H8 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHA3Q9Y5H8 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHA3Q9Y5H8 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHA3Q9Y5H8 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHA3Q9Y5H8 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PCDHA3Q9Y5H8 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.16■□□□□ 0.34
PCDHA3Q9Y5H8 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHA3Q9Y5H8 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHA3Q9Y5H8 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHA3Q9Y5H8 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PCDHA3Q9Y5H8 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 AL513480.1-201ENST00000451731 511 ntBASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 AL691432.3-201ENST00000621860 400 ntBASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHA3Q9Y5H8 AC008677.1-201ENST00000519230 1561 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms