Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
R3HCC1Q9Y3T6 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
R3HCC1Q9Y3T6 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
R3HCC1Q9Y3T6 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
R3HCC1Q9Y3T6 AC006058.4-201ENST00000624016 1670 ntBASIC18.92■□□□□ 0.62
R3HCC1Q9Y3T6 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
R3HCC1Q9Y3T6 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.92■□□□□ 0.62
R3HCC1Q9Y3T6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
R3HCC1Q9Y3T6 ALOX12P2-203ENST00000570921 1945 ntBASIC18.92■□□□□ 0.62
R3HCC1Q9Y3T6 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
R3HCC1Q9Y3T6 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
R3HCC1Q9Y3T6 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
R3HCC1Q9Y3T6 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
R3HCC1Q9Y3T6 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
R3HCC1Q9Y3T6 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.92■□□□□ 0.62
R3HCC1Q9Y3T6 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
R3HCC1Q9Y3T6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.92■□□□□ 0.62
R3HCC1Q9Y3T6 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.92■□□□□ 0.62
R3HCC1Q9Y3T6 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
R3HCC1Q9Y3T6 STK19B-204ENST00000512515 211 ntBASIC18.92■□□□□ 0.62
R3HCC1Q9Y3T6 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
R3HCC1Q9Y3T6 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
R3HCC1Q9Y3T6 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
R3HCC1Q9Y3T6 AL121912.1-201ENST00000603683 238 ntBASIC18.92■□□□□ 0.62
R3HCC1Q9Y3T6 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.92■□□□□ 0.62
R3HCC1Q9Y3T6 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
R3HCC1Q9Y3T6 AL355877.3-201ENST00000622820 899 ntBASIC18.92■□□□□ 0.62
R3HCC1Q9Y3T6 AD001527.2-201ENST00000622994 785 ntBASIC18.92■□□□□ 0.62
R3HCC1Q9Y3T6 AC068587.6-202ENST00000641839 5619 ntBASIC18.92■□□□□ 0.62
R3HCC1Q9Y3T6 AL049757.1-201ENST00000616842 1596 ntBASIC18.92■□□□□ 0.62
R3HCC1Q9Y3T6 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
R3HCC1Q9Y3T6 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
R3HCC1Q9Y3T6 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
R3HCC1Q9Y3T6 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
R3HCC1Q9Y3T6 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.92■□□□□ 0.62
R3HCC1Q9Y3T6 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
R3HCC1Q9Y3T6 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
R3HCC1Q9Y3T6 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 AC064862.7-201ENST00000604520 867 ntBASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 AP000867.4-201ENST00000641616 219 ntBASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
R3HCC1Q9Y3T6 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 AL353593.2-201ENST00000602529 1483 ntBASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 PMPCAP1-201ENST00000508114 1576 ntBASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 AC005104.2-201ENST00000427818 678 ntBASIC18.9■□□□□ 0.62
R3HCC1Q9Y3T6 AF238378.1-201ENST00000526806 358 ntBASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms