Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.46□□□□□ -0.09
RHBDD3Q9Y3P4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
RHBDD3Q9Y3P4 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.46□□□□□ -0.09
RHBDD3Q9Y3P4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
RHBDD3Q9Y3P4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.46□□□□□ -0.09
RHBDD3Q9Y3P4 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.46□□□□□ -0.09
RHBDD3Q9Y3P4 AC008667.4-201ENST00000607370 168 ntBASIC14.46□□□□□ -0.09
RHBDD3Q9Y3P4 FAM215A-202ENST00000632077 792 ntBASIC14.46□□□□□ -0.09
RHBDD3Q9Y3P4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.46□□□□□ -0.09
RHBDD3Q9Y3P4 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RHBDD3Q9Y3P4 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RHBDD3Q9Y3P4 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RHBDD3Q9Y3P4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RHBDD3Q9Y3P4 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.46□□□□□ -0.09
RHBDD3Q9Y3P4 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RHBDD3Q9Y3P4 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RHBDD3Q9Y3P4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RHBDD3Q9Y3P4 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RHBDD3Q9Y3P4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RHBDD3Q9Y3P4 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RHBDD3Q9Y3P4 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RHBDD3Q9Y3P4 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
RHBDD3Q9Y3P4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.46□□□□□ -0.1
RHBDD3Q9Y3P4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
RHBDD3Q9Y3P4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.46□□□□□ -0.1
RHBDD3Q9Y3P4 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RHBDD3Q9Y3P4 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
RHBDD3Q9Y3P4 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RHBDD3Q9Y3P4 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 HYMAI-201ENST00000635591 3347 ntBASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 IGHV3-65-201ENST00000523210 341 ntBASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 AC107918.2-201ENST00000530817 355 ntBASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 AP002469.2-201ENST00000531724 424 ntBASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 AC104692.2-201ENST00000603054 253 ntBASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 AC005593.1-201ENST00000624894 515 ntBASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 AL512652.2-201ENST00000625156 1716 ntBASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 AC011270.2-201ENST00000624293 2550 ntBASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.45□□□□□ -0.1
RHBDD3Q9Y3P4 AL671710.1-201ENST00000610245 2349 ntBASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
RHBDD3Q9Y3P4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms