Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.83□□□□□ -0.2
KCNIP3Q9Y2W7 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
KCNIP3Q9Y2W7 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
KCNIP3Q9Y2W7 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
KCNIP3Q9Y2W7 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.83□□□□□ -0.2
KCNIP3Q9Y2W7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
KCNIP3Q9Y2W7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC13.83□□□□□ -0.2
KCNIP3Q9Y2W7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC13.83□□□□□ -0.2
KCNIP3Q9Y2W7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC13.83□□□□□ -0.2
KCNIP3Q9Y2W7 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
KCNIP3Q9Y2W7 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
KCNIP3Q9Y2W7 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
KCNIP3Q9Y2W7 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
KCNIP3Q9Y2W7 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
KCNIP3Q9Y2W7 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.83□□□□□ -0.2
KCNIP3Q9Y2W7 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
KCNIP3Q9Y2W7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 AC246785.2-201ENST00000432512 513 ntBASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 AP002414.2-201ENST00000591780 3365 ntBASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.82□□□□□ -0.2
KCNIP3Q9Y2W7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 TSPY5P-201ENST00000426936 936 ntBASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 TSPY22P-201ENST00000427496 604 ntBASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 AC010203.1-204ENST00000548782 407 ntBASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 AC011467.2-201ENST00000598425 242 ntBASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms