Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP25Q9UHP3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP25Q9UHP3 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP25Q9UHP3 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.9■□□□□ 0.62
USP25Q9UHP3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.9■□□□□ 0.62
USP25Q9UHP3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.9■□□□□ 0.62
USP25Q9UHP3 ELK2BP-201ENST00000415014 1224 ntBASIC18.9■□□□□ 0.62
USP25Q9UHP3 AF238378.1-201ENST00000526806 358 ntBASIC18.9■□□□□ 0.62
USP25Q9UHP3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.9■□□□□ 0.62
USP25Q9UHP3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.9■□□□□ 0.62
USP25Q9UHP3 GGTLC5P-201ENST00000617623 998 ntBASIC18.9■□□□□ 0.62
USP25Q9UHP3 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
USP25Q9UHP3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.9■□□□□ 0.62
USP25Q9UHP3 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP25Q9UHP3 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP25Q9UHP3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
USP25Q9UHP3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC18.9■□□□□ 0.62
USP25Q9UHP3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.9■□□□□ 0.62
USP25Q9UHP3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
USP25Q9UHP3 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC18.9■□□□□ 0.62
USP25Q9UHP3 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
USP25Q9UHP3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.9■□□□□ 0.62
USP25Q9UHP3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
USP25Q9UHP3 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
USP25Q9UHP3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
USP25Q9UHP3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.89■□□□□ 0.62
USP25Q9UHP3 GGT3P-204ENST00000453783 1664 ntBASIC18.89■□□□□ 0.61
USP25Q9UHP3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP25Q9UHP3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.89■□□□□ 0.61
USP25Q9UHP3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
USP25Q9UHP3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.89■□□□□ 0.61
USP25Q9UHP3 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
USP25Q9UHP3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP25Q9UHP3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
USP25Q9UHP3 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP25Q9UHP3 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP25Q9UHP3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP25Q9UHP3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USP25Q9UHP3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
USP25Q9UHP3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP25Q9UHP3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USP25Q9UHP3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.89■□□□□ 0.61
USP25Q9UHP3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USP25Q9UHP3 KRT18P27-201ENST00000427733 1299 ntBASIC18.89■□□□□ 0.61
USP25Q9UHP3 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.89■□□□□ 0.61
USP25Q9UHP3 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.89■□□□□ 0.61
USP25Q9UHP3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.89■□□□□ 0.61
USP25Q9UHP3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
USP25Q9UHP3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP25Q9UHP3 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.89■□□□□ 0.61
USP25Q9UHP3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
USP25Q9UHP3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USP25Q9UHP3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.89■□□□□ 0.61
USP25Q9UHP3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP25Q9UHP3 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP25Q9UHP3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
USP25Q9UHP3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC18.89■□□□□ 0.61
USP25Q9UHP3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP25Q9UHP3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC18.88■□□□□ 0.61
USP25Q9UHP3 AC022532.1-201ENST00000624563 1728 ntBASIC18.88■□□□□ 0.61
USP25Q9UHP3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
USP25Q9UHP3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP25Q9UHP3 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP25Q9UHP3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.88■□□□□ 0.61
USP25Q9UHP3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP25Q9UHP3 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP25Q9UHP3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP25Q9UHP3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.88■□□□□ 0.61
USP25Q9UHP3 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.88■□□□□ 0.61
USP25Q9UHP3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP25Q9UHP3 SLC25A6P2-201ENST00000497974 877 ntBASIC18.88■□□□□ 0.61
USP25Q9UHP3 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.88■□□□□ 0.61
USP25Q9UHP3 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.88■□□□□ 0.61
USP25Q9UHP3 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.88■□□□□ 0.61
USP25Q9UHP3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.88■□□□□ 0.61
USP25Q9UHP3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP25Q9UHP3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP25Q9UHP3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.88■□□□□ 0.61
USP25Q9UHP3 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP25Q9UHP3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP25Q9UHP3 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC18.88■□□□□ 0.61
USP25Q9UHP3 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP25Q9UHP3 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP25Q9UHP3 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP25Q9UHP3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
USP25Q9UHP3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP25Q9UHP3 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
USP25Q9UHP3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP25Q9UHP3 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP25Q9UHP3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USP25Q9UHP3 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP25Q9UHP3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.87■□□□□ 0.61
USP25Q9UHP3 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
USP25Q9UHP3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP25Q9UHP3 PRAL-201ENST00000624952 3286 ntBASIC18.87■□□□□ 0.61
USP25Q9UHP3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP25Q9UHP3 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
USP25Q9UHP3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
USP25Q9UHP3 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP25Q9UHP3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms