Protein–RNA interactions for Protein: Q9UD57

NKX1-2, NK1 transcription factor-related protein 2, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-2Q9UD57 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX1-2Q9UD57 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NKX1-2Q9UD57 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.66■□□□□ 0.1
NKX1-2Q9UD57 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.66■□□□□ 0.1
NKX1-2Q9UD57 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.66■□□□□ 0.1
NKX1-2Q9UD57 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.66■□□□□ 0.1
NKX1-2Q9UD57 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
NKX1-2Q9UD57 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NKX1-2Q9UD57 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
NKX1-2Q9UD57 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX1-2Q9UD57 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
NKX1-2Q9UD57 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NKX1-2Q9UD57 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX1-2Q9UD57 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX1-2Q9UD57 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NKX1-2Q9UD57 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NKX1-2Q9UD57 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX1-2Q9UD57 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX1-2Q9UD57 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX1-2Q9UD57 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC15.65■□□□□ 0.1
NKX1-2Q9UD57 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.65■□□□□ 0.1
NKX1-2Q9UD57 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
NKX1-2Q9UD57 AP003733.1-201ENST00000491725 852 ntBASIC15.65■□□□□ 0.1
NKX1-2Q9UD57 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC15.65■□□□□ 0.1
NKX1-2Q9UD57 KLF13-207ENST00000560473 489 ntTSL 3 BASIC15.65■□□□□ 0.1
NKX1-2Q9UD57 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NKX1-2Q9UD57 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.65■□□□□ 0.1
NKX1-2Q9UD57 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC15.65■□□□□ 0.1
NKX1-2Q9UD57 PGM5P2-202ENST00000637225 1043 ntBASIC15.65■□□□□ 0.1
NKX1-2Q9UD57 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX1-2Q9UD57 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.65■□□□□ 0.1
NKX1-2Q9UD57 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX1-2Q9UD57 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.65■□□□□ 0.1
NKX1-2Q9UD57 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX1-2Q9UD57 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX1-2Q9UD57 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX1-2Q9UD57 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.65■□□□□ 0.1
NKX1-2Q9UD57 AC009090.5-201ENST00000624886 2285 ntBASIC15.65■□□□□ 0.1
NKX1-2Q9UD57 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NKX1-2Q9UD57 LINC01144-201ENST00000626198 1710 ntBASIC15.65■□□□□ 0.1
NKX1-2Q9UD57 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.65■□□□□ 0.1
NKX1-2Q9UD57 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NKX1-2Q9UD57 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC15.65■□□□□ 0.1
NKX1-2Q9UD57 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NKX1-2Q9UD57 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
NKX1-2Q9UD57 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.1
NKX1-2Q9UD57 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 AC105250.1-201ENST00000509378 2057 ntBASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 AL353692.3-201ENST00000407031 1396 ntBASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 AC103564.2-201ENST00000432853 1299 ntBASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 AC010654.1-201ENST00000615722 808 ntBASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 AC010653.2-201ENST00000623505 997 ntBASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.64■□□□□ 0.09
NKX1-2Q9UD57 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NKX1-2Q9UD57 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NKX1-2Q9UD57 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.63■□□□□ 0.09
NKX1-2Q9UD57 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NKX1-2Q9UD57 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
NKX1-2Q9UD57 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NKX1-2Q9UD57 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NKX1-2Q9UD57 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
NKX1-2Q9UD57 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NKX1-2Q9UD57 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NKX1-2Q9UD57 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NKX1-2Q9UD57 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms