Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CXXC1Q9P0U4 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CXXC1Q9P0U4 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CXXC1Q9P0U4 RPL13AP20-201ENST00000459725 609 ntBASIC17.42■□□□□ 0.38
CXXC1Q9P0U4 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.42■□□□□ 0.38
CXXC1Q9P0U4 RNA5SP423-201ENST00000517127 109 ntBASIC17.42■□□□□ 0.38
CXXC1Q9P0U4 AC068587.3-201ENST00000526613 355 ntBASIC17.42■□□□□ 0.38
CXXC1Q9P0U4 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CXXC1Q9P0U4 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.42■□□□□ 0.38
CXXC1Q9P0U4 AL031731.1-201ENST00000642131 2094 ntBASIC17.42■□□□□ 0.38
CXXC1Q9P0U4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CXXC1Q9P0U4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.42■□□□□ 0.38
CXXC1Q9P0U4 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.42■□□□□ 0.38
CXXC1Q9P0U4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.42■□□□□ 0.38
CXXC1Q9P0U4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.42■□□□□ 0.38
CXXC1Q9P0U4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXXC1Q9P0U4 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CXXC1Q9P0U4 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.42■□□□□ 0.38
CXXC1Q9P0U4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.42■□□□□ 0.38
CXXC1Q9P0U4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CXXC1Q9P0U4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXXC1Q9P0U4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.42■□□□□ 0.38
CXXC1Q9P0U4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXXC1Q9P0U4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXXC1Q9P0U4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CXXC1Q9P0U4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXXC1Q9P0U4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CXXC1Q9P0U4 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.41■□□□□ 0.38
CXXC1Q9P0U4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.41■□□□□ 0.38
CXXC1Q9P0U4 AC008764.6-201ENST00000595909 2069 ntBASIC17.41■□□□□ 0.38
CXXC1Q9P0U4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXXC1Q9P0U4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CXXC1Q9P0U4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXXC1Q9P0U4 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.41■□□□□ 0.38
CXXC1Q9P0U4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.41■□□□□ 0.38
CXXC1Q9P0U4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CXXC1Q9P0U4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CXXC1Q9P0U4 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CXXC1Q9P0U4 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXXC1Q9P0U4 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXXC1Q9P0U4 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.41■□□□□ 0.38
CXXC1Q9P0U4 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.41■□□□□ 0.38
CXXC1Q9P0U4 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.41■□□□□ 0.38
CXXC1Q9P0U4 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.41■□□□□ 0.38
CXXC1Q9P0U4 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC17.41■□□□□ 0.38
CXXC1Q9P0U4 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.41■□□□□ 0.38
CXXC1Q9P0U4 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.41■□□□□ 0.38
CXXC1Q9P0U4 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.41■□□□□ 0.38
CXXC1Q9P0U4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.41■□□□□ 0.38
CXXC1Q9P0U4 BRI3BPP1-201ENST00000594224 787 ntBASIC17.41■□□□□ 0.38
CXXC1Q9P0U4 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.41■□□□□ 0.38
CXXC1Q9P0U4 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.41■□□□□ 0.38
CXXC1Q9P0U4 AL139011.1-202ENST00000642063 584 ntBASIC17.41■□□□□ 0.38
CXXC1Q9P0U4 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXXC1Q9P0U4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXXC1Q9P0U4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXXC1Q9P0U4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXXC1Q9P0U4 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CXXC1Q9P0U4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXXC1Q9P0U4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CXXC1Q9P0U4 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CXXC1Q9P0U4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.4■□□□□ 0.38
CXXC1Q9P0U4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CXXC1Q9P0U4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CXXC1Q9P0U4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CXXC1Q9P0U4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CXXC1Q9P0U4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CXXC1Q9P0U4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CXXC1Q9P0U4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.4■□□□□ 0.38
CXXC1Q9P0U4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.4■□□□□ 0.38
CXXC1Q9P0U4 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC17.4■□□□□ 0.38
CXXC1Q9P0U4 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.4■□□□□ 0.38
CXXC1Q9P0U4 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CXXC1Q9P0U4 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.4■□□□□ 0.38
CXXC1Q9P0U4 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.4■□□□□ 0.38
CXXC1Q9P0U4 PTP4A1P2-201ENST00000546033 454 ntBASIC17.4■□□□□ 0.38
CXXC1Q9P0U4 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.4■□□□□ 0.38
CXXC1Q9P0U4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.4■□□□□ 0.38
CXXC1Q9P0U4 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.4■□□□□ 0.38
CXXC1Q9P0U4 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.4■□□□□ 0.38
CXXC1Q9P0U4 AC010328.2-201ENST00000597698 1111 ntBASIC17.4■□□□□ 0.38
CXXC1Q9P0U4 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.4■□□□□ 0.38
CXXC1Q9P0U4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CXXC1Q9P0U4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.4■□□□□ 0.38
CXXC1Q9P0U4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.4■□□□□ 0.38
CXXC1Q9P0U4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CXXC1Q9P0U4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CXXC1Q9P0U4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CXXC1Q9P0U4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CXXC1Q9P0U4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CXXC1Q9P0U4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CXXC1Q9P0U4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CXXC1Q9P0U4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CXXC1Q9P0U4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CXXC1Q9P0U4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CXXC1Q9P0U4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CXXC1Q9P0U4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CXXC1Q9P0U4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CXXC1Q9P0U4 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CXXC1Q9P0U4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms