Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TMEM248Q9NWD8 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM248Q9NWD8 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM248Q9NWD8 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
TMEM248Q9NWD8 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.74■□□□□ 0.27
TMEM248Q9NWD8 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TMEM248Q9NWD8 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM248Q9NWD8 RNA5SP410-201ENST00000516285 106 ntBASIC16.74■□□□□ 0.27
TMEM248Q9NWD8 AC109322.1-201ENST00000524499 1264 ntBASIC16.74■□□□□ 0.27
TMEM248Q9NWD8 AL512356.2-201ENST00000546955 174 ntBASIC16.74■□□□□ 0.27
TMEM248Q9NWD8 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM248Q9NWD8 MIR4321-201ENST00000592276 80 ntBASIC16.74■□□□□ 0.27
TMEM248Q9NWD8 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM248Q9NWD8 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.74■□□□□ 0.27
TMEM248Q9NWD8 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.74■□□□□ 0.27
TMEM248Q9NWD8 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM248Q9NWD8 PCDHB19P-201ENST00000570871 2371 ntBASIC16.74■□□□□ 0.27
TMEM248Q9NWD8 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM248Q9NWD8 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM248Q9NWD8 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM248Q9NWD8 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.74■□□□□ 0.27
TMEM248Q9NWD8 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
TMEM248Q9NWD8 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM248Q9NWD8 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM248Q9NWD8 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.74■□□□□ 0.27
TMEM248Q9NWD8 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM248Q9NWD8 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.74■□□□□ 0.27
TMEM248Q9NWD8 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM248Q9NWD8 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TMEM248Q9NWD8 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TMEM248Q9NWD8 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEM248Q9NWD8 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM248Q9NWD8 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM248Q9NWD8 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TMEM248Q9NWD8 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM248Q9NWD8 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM248Q9NWD8 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.73■□□□□ 0.27
TMEM248Q9NWD8 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM248Q9NWD8 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM248Q9NWD8 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.73■□□□□ 0.27
TMEM248Q9NWD8 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM248Q9NWD8 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TMEM248Q9NWD8 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM248Q9NWD8 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM248Q9NWD8 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.73■□□□□ 0.27
TMEM248Q9NWD8 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TMEM248Q9NWD8 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.73■□□□□ 0.27
TMEM248Q9NWD8 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TMEM248Q9NWD8 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.73■□□□□ 0.27
TMEM248Q9NWD8 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEM248Q9NWD8 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM248Q9NWD8 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.73■□□□□ 0.27
TMEM248Q9NWD8 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM248Q9NWD8 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM248Q9NWD8 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM248Q9NWD8 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEM248Q9NWD8 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM248Q9NWD8 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.73■□□□□ 0.27
TMEM248Q9NWD8 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM248Q9NWD8 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
TMEM248Q9NWD8 CYP2T1P-202ENST00000641596 2535 ntBASIC16.72■□□□□ 0.27
TMEM248Q9NWD8 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.72■□□□□ 0.27
TMEM248Q9NWD8 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
TMEM248Q9NWD8 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TMEM248Q9NWD8 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.72■□□□□ 0.27
TMEM248Q9NWD8 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM248Q9NWD8 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM248Q9NWD8 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM248Q9NWD8 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TMEM248Q9NWD8 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TMEM248Q9NWD8 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM248Q9NWD8 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.72■□□□□ 0.27
TMEM248Q9NWD8 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.72■□□□□ 0.27
TMEM248Q9NWD8 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM248Q9NWD8 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
TMEM248Q9NWD8 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM248Q9NWD8 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM248Q9NWD8 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.72■□□□□ 0.27
TMEM248Q9NWD8 AC092183.1-201ENST00000469884 875 ntBASIC16.72■□□□□ 0.27
TMEM248Q9NWD8 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.72■□□□□ 0.27
TMEM248Q9NWD8 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
TMEM248Q9NWD8 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM248Q9NWD8 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.72■□□□□ 0.27
TMEM248Q9NWD8 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM248Q9NWD8 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM248Q9NWD8 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM248Q9NWD8 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TMEM248Q9NWD8 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.72■□□□□ 0.27
TMEM248Q9NWD8 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.72■□□□□ 0.27
TMEM248Q9NWD8 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.72■□□□□ 0.27
TMEM248Q9NWD8 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM248Q9NWD8 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM248Q9NWD8 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM248Q9NWD8 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM248Q9NWD8 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.72■□□□□ 0.27
TMEM248Q9NWD8 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM248Q9NWD8 KRT18P28-201ENST00000453838 1332 ntBASIC16.71■□□□□ 0.27
TMEM248Q9NWD8 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
TMEM248Q9NWD8 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM248Q9NWD8 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms