Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.74□□□□□ -0.21
LIN7CQ9NUP9 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 AC132872.4-202ENST00000622924 2756 ntBASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 MRPL3P1-201ENST00000400109 1033 ntBASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 AC009078.2-202ENST00000463353 338 ntBASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 AL353135.1-201ENST00000606729 504 ntBASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 MIR1199-201ENST00000621445 119 ntBASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 AC004706.3-202ENST00000621574 984 ntBASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 AC008735.5-201ENST00000623544 497 ntBASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 GGT4P-201ENST00000623672 1708 ntBASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 AC006449.6-201ENST00000612330 2296 ntBASIC13.73□□□□□ -0.21
LIN7CQ9NUP9 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 PAUPAR-201ENST00000630360 2965 ntBASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 AL590787.1-201ENST00000568856 1315 ntBASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 PRKN-208ENST00000610470 531 ntTSL 2 BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 PRKN-209ENST00000612485 225 ntTSL 5 BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.72□□□□□ -0.21
LIN7CQ9NUP9 PGM5P2-202ENST00000637225 1043 ntBASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms