Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 AC243591.1-201ENST00000452967 1364 ntBASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 AL353135.1-201ENST00000606729 504 ntBASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 AL022326.1-202ENST00000641533 845 ntBASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 AC006277.1-201ENST00000624348 1610 ntBASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 AP005117.1-201ENST00000584346 1413 ntBASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PCDHB16Q9NRJ7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 AC004817.3-201ENST00000602957 2129 ntBASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 DUX4L17-201ENST00000557360 1267 ntBASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 AL590787.1-201ENST00000568856 1315 ntBASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHB16Q9NRJ7 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 TOP3BP1-201ENST00000420768 1380 ntBASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms