Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 AC006277.1-201ENST00000624348 1610 ntBASIC15.26■□□□□ 0.03
UBQLN3Q9H347 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 AC254562.1-201ENST00000417586 456 ntBASIC15.26■□□□□ 0.03
UBQLN3Q9H347 DNAJB3-202ENST00000449667 1266 ntBASIC15.26■□□□□ 0.03
UBQLN3Q9H347 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.26■□□□□ 0.03
UBQLN3Q9H347 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 AC109635.5-201ENST00000533593 962 ntBASIC15.26■□□□□ 0.03
UBQLN3Q9H347 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 AC013467.2-201ENST00000605472 835 ntBASIC15.26■□□□□ 0.03
UBQLN3Q9H347 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 AC099522.2-201ENST00000607001 744 ntBASIC15.26■□□□□ 0.03
UBQLN3Q9H347 AL139011.1-202ENST00000642063 584 ntBASIC15.26■□□□□ 0.03
UBQLN3Q9H347 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 MTHFR-217ENST00000641820 1569 ntBASIC15.26■□□□□ 0.03
UBQLN3Q9H347 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 AC092183.1-201ENST00000469884 875 ntBASIC15.25■□□□□ 0.03
UBQLN3Q9H347 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.25■□□□□ 0.03
UBQLN3Q9H347 MIR3909-201ENST00000579518 119 ntBASIC15.25■□□□□ 0.03
UBQLN3Q9H347 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.25■□□□□ 0.03
UBQLN3Q9H347 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
UBQLN3Q9H347 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 RNU1-129P-201ENST00000384064 167 ntBASIC15.24■□□□□ 0.03
UBQLN3Q9H347 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms