Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 AC023310.3-201ENST00000557027 670 ntBASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 AC100756.1-201ENST00000562736 682 ntBASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 AC138749.3-201ENST00000567691 622 ntBASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 BTNL10-201ENST00000595971 695 ntBASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 AC116165.1-201ENST00000611806 668 ntBASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 WFDC1-204ENST00000613603 549 ntBASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBE2OQ9C0C9 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.06■□□□□ 0.48
UBE2OQ9C0C9 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UBE2OQ9C0C9 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBE2OQ9C0C9 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBE2OQ9C0C9 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBE2OQ9C0C9 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UBE2OQ9C0C9 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
UBE2OQ9C0C9 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBE2OQ9C0C9 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBE2OQ9C0C9 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UBE2OQ9C0C9 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.06■□□□□ 0.48
UBE2OQ9C0C9 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
UBE2OQ9C0C9 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
UBE2OQ9C0C9 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.06■□□□□ 0.48
UBE2OQ9C0C9 CTBP2P5-201ENST00000454986 1264 ntBASIC18.06■□□□□ 0.48
UBE2OQ9C0C9 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.06■□□□□ 0.48
UBE2OQ9C0C9 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.06■□□□□ 0.48
UBE2OQ9C0C9 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC18.06■□□□□ 0.48
UBE2OQ9C0C9 AC093726.1-201ENST00000608064 963 ntBASIC18.06■□□□□ 0.48
UBE2OQ9C0C9 AL033527.5-201ENST00000641382 801 ntBASIC18.06■□□□□ 0.48
UBE2OQ9C0C9 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBE2OQ9C0C9 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBE2OQ9C0C9 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UBE2OQ9C0C9 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.06■□□□□ 0.48
UBE2OQ9C0C9 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBE2OQ9C0C9 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.06■□□□□ 0.48
UBE2OQ9C0C9 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBE2OQ9C0C9 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
UBE2OQ9C0C9 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
UBE2OQ9C0C9 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.06■□□□□ 0.48
UBE2OQ9C0C9 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.06■□□□□ 0.48
UBE2OQ9C0C9 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UBE2OQ9C0C9 TOP3BP1-201ENST00000420768 1380 ntBASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 AC098850.1-201ENST00000419919 790 ntBASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 AL139099.5-201ENST00000635274 300 ntBASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms