Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CNTNAP4Q9C0A0 MPV17-206ENST00000402722 827 ntTSL 3 BASIC20.38■□□□□ 0.85
CNTNAP4Q9C0A0 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNTNAP4Q9C0A0 TOMM22P5-201ENST00000416399 439 ntBASIC20.38■□□□□ 0.85
CNTNAP4Q9C0A0 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC20.38■□□□□ 0.85
CNTNAP4Q9C0A0 FAM21FP-201ENST00000426241 1131 ntBASIC20.38■□□□□ 0.85
CNTNAP4Q9C0A0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CNTNAP4Q9C0A0 PTP4A1P2-201ENST00000546033 454 ntBASIC20.38■□□□□ 0.85
CNTNAP4Q9C0A0 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC20.38■□□□□ 0.85
CNTNAP4Q9C0A0 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC20.38■□□□□ 0.85
CNTNAP4Q9C0A0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CNTNAP4Q9C0A0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.38■□□□□ 0.85
CNTNAP4Q9C0A0 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNTNAP4Q9C0A0 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CNTNAP4Q9C0A0 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNTNAP4Q9C0A0 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNTNAP4Q9C0A0 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC20.38■□□□□ 0.85
CNTNAP4Q9C0A0 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC20.38■□□□□ 0.85
CNTNAP4Q9C0A0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNTNAP4Q9C0A0 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNTNAP4Q9C0A0 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC20.38■□□□□ 0.85
CNTNAP4Q9C0A0 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNTNAP4Q9C0A0 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNTNAP4Q9C0A0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.37■□□□□ 0.85
CNTNAP4Q9C0A0 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNTNAP4Q9C0A0 MGST3-203ENST00000367885 680 ntTSL 2 BASIC20.37■□□□□ 0.85
CNTNAP4Q9C0A0 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC20.37■□□□□ 0.85
CNTNAP4Q9C0A0 NME4-207ENST00000450036 985 ntTSL 3 BASIC20.37■□□□□ 0.85
CNTNAP4Q9C0A0 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC20.37■□□□□ 0.85
CNTNAP4Q9C0A0 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC20.37■□□□□ 0.85
CNTNAP4Q9C0A0 AC108725.1-201ENST00000495472 409 ntBASIC20.37■□□□□ 0.85
CNTNAP4Q9C0A0 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC20.37■□□□□ 0.85
CNTNAP4Q9C0A0 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC20.37■□□□□ 0.85
CNTNAP4Q9C0A0 AC243562.2-201ENST00000561247 970 ntBASIC20.37■□□□□ 0.85
CNTNAP4Q9C0A0 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC20.37■□□□□ 0.85
CNTNAP4Q9C0A0 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC20.37■□□□□ 0.85
CNTNAP4Q9C0A0 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CNTNAP4Q9C0A0 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC20.37■□□□□ 0.85
CNTNAP4Q9C0A0 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNTNAP4Q9C0A0 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CNTNAP4Q9C0A0 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNTNAP4Q9C0A0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CNTNAP4Q9C0A0 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CNTNAP4Q9C0A0 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNTNAP4Q9C0A0 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.37■□□□□ 0.85
CNTNAP4Q9C0A0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CNTNAP4Q9C0A0 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
CNTNAP4Q9C0A0 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CNTNAP4Q9C0A0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.37■□□□□ 0.85
CNTNAP4Q9C0A0 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNTNAP4Q9C0A0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CNTNAP4Q9C0A0 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNTNAP4Q9C0A0 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC20.36■□□□□ 0.85
CNTNAP4Q9C0A0 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNTNAP4Q9C0A0 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CNTNAP4Q9C0A0 BRWD1P1-201ENST00000401091 371 ntBASIC20.36■□□□□ 0.85
CNTNAP4Q9C0A0 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC20.36■□□□□ 0.85
CNTNAP4Q9C0A0 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC20.36■□□□□ 0.85
CNTNAP4Q9C0A0 SOCS2P1-201ENST00000417727 557 ntBASIC20.36■□□□□ 0.85
CNTNAP4Q9C0A0 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC20.36■□□□□ 0.85
CNTNAP4Q9C0A0 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC20.36■□□□□ 0.85
CNTNAP4Q9C0A0 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC20.36■□□□□ 0.85
CNTNAP4Q9C0A0 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CNTNAP4Q9C0A0 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC20.36■□□□□ 0.85
CNTNAP4Q9C0A0 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC20.36■□□□□ 0.85
CNTNAP4Q9C0A0 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC20.36■□□□□ 0.85
CNTNAP4Q9C0A0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CNTNAP4Q9C0A0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
CNTNAP4Q9C0A0 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNTNAP4Q9C0A0 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CNTNAP4Q9C0A0 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNTNAP4Q9C0A0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CNTNAP4Q9C0A0 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.36■□□□□ 0.85
CNTNAP4Q9C0A0 AC141586.5-201ENST00000624546 2050 ntBASIC20.36■□□□□ 0.85
CNTNAP4Q9C0A0 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CNTNAP4Q9C0A0 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNTNAP4Q9C0A0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNTNAP4Q9C0A0 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNTNAP4Q9C0A0 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNTNAP4Q9C0A0 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CNTNAP4Q9C0A0 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CNTNAP4Q9C0A0 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNTNAP4Q9C0A0 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CNTNAP4Q9C0A0 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC20.35■□□□□ 0.85
CNTNAP4Q9C0A0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CNTNAP4Q9C0A0 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC20.35■□□□□ 0.85
CNTNAP4Q9C0A0 LETM1P2-201ENST00000597330 2178 ntBASIC20.35■□□□□ 0.85
CNTNAP4Q9C0A0 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNTNAP4Q9C0A0 BCYRN1-201ENST00000418539 200 ntBASIC20.35■□□□□ 0.85
CNTNAP4Q9C0A0 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CNTNAP4Q9C0A0 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC20.35■□□□□ 0.85
CNTNAP4Q9C0A0 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC20.35■□□□□ 0.85
CNTNAP4Q9C0A0 AC244093.1-201ENST00000610837 814 ntBASIC20.35■□□□□ 0.85
CNTNAP4Q9C0A0 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNTNAP4Q9C0A0 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNTNAP4Q9C0A0 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNTNAP4Q9C0A0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.35■□□□□ 0.85
CNTNAP4Q9C0A0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNTNAP4Q9C0A0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNTNAP4Q9C0A0 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms