Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 AC025062.2-201ENST00000605477 670 ntBASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 AC010654.1-201ENST00000615722 808 ntBASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 AL805961.1-202ENST00000641562 540 ntBASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 AC104640.1-201ENST00000562617 2109 ntBASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 AL353732.1-201ENST00000569618 1459 ntBASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 AC073347.1-201ENST00000421633 2643 ntBASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 AC112504.1-201ENST00000623415 1841 ntBASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 AC023824.1-201ENST00000562945 2975 ntBASIC13.92□□□□□ -0.18
HDHD3Q9BSH5 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 ARMC10P1-201ENST00000313754 855 ntBASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 RNF146-204ENST00000476956 884 ntTSL 2 BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 AC087641.1-201ENST00000557561 1021 ntBASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 AC021087.4-201ENST00000563761 564 ntBASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms