Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.02■□□□□ 0.32
HERPUD2Q9BSE4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HERPUD2Q9BSE4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HERPUD2Q9BSE4 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HERPUD2Q9BSE4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.02■□□□□ 0.32
HERPUD2Q9BSE4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HERPUD2Q9BSE4 KRT18P58-201ENST00000527480 1120 ntBASIC17.02■□□□□ 0.32
HERPUD2Q9BSE4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HERPUD2Q9BSE4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HERPUD2Q9BSE4 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.02■□□□□ 0.32
HERPUD2Q9BSE4 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.02■□□□□ 0.32
HERPUD2Q9BSE4 AL031432.2-201ENST00000566714 459 ntBASIC17.02■□□□□ 0.32
HERPUD2Q9BSE4 AL928711.1-201ENST00000570165 459 ntBASIC17.02■□□□□ 0.32
HERPUD2Q9BSE4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.02■□□□□ 0.32
HERPUD2Q9BSE4 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.02■□□□□ 0.32
HERPUD2Q9BSE4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.02■□□□□ 0.32
HERPUD2Q9BSE4 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HERPUD2Q9BSE4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HERPUD2Q9BSE4 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
HERPUD2Q9BSE4 AC092919.2-201ENST00000623631 1645 ntBASIC17.02■□□□□ 0.31
HERPUD2Q9BSE4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
HERPUD2Q9BSE4 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HERPUD2Q9BSE4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HERPUD2Q9BSE4 AC008677.1-201ENST00000519230 1561 ntBASIC17.02■□□□□ 0.31
HERPUD2Q9BSE4 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
HERPUD2Q9BSE4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
HERPUD2Q9BSE4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 RHOQP3-201ENST00000437982 621 ntBASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 MIR3909-201ENST00000579518 119 ntBASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 AC021097.1-201ENST00000607902 574 ntBASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 AL645728.2-201ENST00000641974 660 ntBASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HERPUD2Q9BSE4 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
HERPUD2Q9BSE4 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17■□□□□ 0.31
HERPUD2Q9BSE4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
HERPUD2Q9BSE4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17■□□□□ 0.31
HERPUD2Q9BSE4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HERPUD2Q9BSE4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17■□□□□ 0.31
HERPUD2Q9BSE4 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HERPUD2Q9BSE4 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
HERPUD2Q9BSE4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HERPUD2Q9BSE4 MIR574-201ENST00000385209 96 ntBASIC17■□□□□ 0.31
HERPUD2Q9BSE4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17■□□□□ 0.31
HERPUD2Q9BSE4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17■□□□□ 0.31
HERPUD2Q9BSE4 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HERPUD2Q9BSE4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17■□□□□ 0.31
HERPUD2Q9BSE4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17■□□□□ 0.31
HERPUD2Q9BSE4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17■□□□□ 0.31
HERPUD2Q9BSE4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
HERPUD2Q9BSE4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17■□□□□ 0.31
HERPUD2Q9BSE4 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17■□□□□ 0.31
HERPUD2Q9BSE4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HERPUD2Q9BSE4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17■□□□□ 0.31
HERPUD2Q9BSE4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
HERPUD2Q9BSE4 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HERPUD2Q9BSE4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17■□□□□ 0.31
HERPUD2Q9BSE4 AC104109.2-201ENST00000602919 1418 ntBASIC17■□□□□ 0.31
HERPUD2Q9BSE4 Z83851.2-201ENST00000609564 659 ntBASIC17■□□□□ 0.31
HERPUD2Q9BSE4 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17■□□□□ 0.31
HERPUD2Q9BSE4 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17■□□□□ 0.31
HERPUD2Q9BSE4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HERPUD2Q9BSE4 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
HERPUD2Q9BSE4 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms