Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMOQ99835 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMOQ99835 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SMOQ99835 MIR943-201ENST00000401286 94 ntBASIC17.16■□□□□ 0.34
SMOQ99835 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SMOQ99835 TREML5P-201ENST00000421694 576 ntBASIC17.16■□□□□ 0.34
SMOQ99835 AL353705.2-201ENST00000428243 662 ntBASIC17.16■□□□□ 0.34
SMOQ99835 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.16■□□□□ 0.34
SMOQ99835 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.16■□□□□ 0.34
SMOQ99835 AC105021.1-202ENST00000570572 669 ntBASIC17.16■□□□□ 0.34
SMOQ99835 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMOQ99835 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SMOQ99835 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SMOQ99835 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.16■□□□□ 0.34
SMOQ99835 AC092364.2-201ENST00000596710 2692 ntBASIC17.16■□□□□ 0.34
SMOQ99835 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMOQ99835 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMOQ99835 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMOQ99835 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMOQ99835 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SMOQ99835 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.16■□□□□ 0.34
SMOQ99835 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMOQ99835 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMOQ99835 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SMOQ99835 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SMOQ99835 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SMOQ99835 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SMOQ99835 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SMOQ99835 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SMOQ99835 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SMOQ99835 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SMOQ99835 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.15■□□□□ 0.34
SMOQ99835 AL662844.4-201ENST00000606367 2838 ntBASIC17.15■□□□□ 0.34
SMOQ99835 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMOQ99835 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMOQ99835 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.15■□□□□ 0.34
SMOQ99835 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SMOQ99835 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SMOQ99835 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.15■□□□□ 0.34
SMOQ99835 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.15■□□□□ 0.34
SMOQ99835 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.15■□□□□ 0.34
SMOQ99835 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SMOQ99835 MIR4321-201ENST00000592276 80 ntBASIC17.15■□□□□ 0.34
SMOQ99835 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
SMOQ99835 AL365330.1-201ENST00000607459 531 ntBASIC17.15■□□□□ 0.34
SMOQ99835 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.15■□□□□ 0.34
SMOQ99835 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.15■□□□□ 0.34
SMOQ99835 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMOQ99835 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SMOQ99835 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.15■□□□□ 0.34
SMOQ99835 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SMOQ99835 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SMOQ99835 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.15■□□□□ 0.34
SMOQ99835 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMOQ99835 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SMOQ99835 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SMOQ99835 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.15■□□□□ 0.34
SMOQ99835 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
SMOQ99835 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
SMOQ99835 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
SMOQ99835 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.14■□□□□ 0.33
SMOQ99835 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.14■□□□□ 0.33
SMOQ99835 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMOQ99835 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SMOQ99835 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SMOQ99835 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.14■□□□□ 0.33
SMOQ99835 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMOQ99835 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMOQ99835 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.14■□□□□ 0.33
SMOQ99835 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.14■□□□□ 0.33
SMOQ99835 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SMOQ99835 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMOQ99835 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMOQ99835 MIR770-201ENST00000390219 98 ntBASIC17.14■□□□□ 0.33
SMOQ99835 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.14■□□□□ 0.33
SMOQ99835 AC092580.3-201ENST00000430932 139 ntBASIC17.14■□□□□ 0.33
SMOQ99835 AC055876.3-201ENST00000431496 288 ntBASIC17.14■□□□□ 0.33
SMOQ99835 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
SMOQ99835 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.14■□□□□ 0.33
SMOQ99835 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.14■□□□□ 0.33
SMOQ99835 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMOQ99835 AC069120.2-201ENST00000524091 540 ntBASIC17.14■□□□□ 0.33
SMOQ99835 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.14■□□□□ 0.33
SMOQ99835 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.14■□□□□ 0.33
SMOQ99835 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.14■□□□□ 0.33
SMOQ99835 RN7SL828P-201ENST00000607615 303 ntBASIC17.14■□□□□ 0.33
SMOQ99835 AL133215.2-201ENST00000609242 977 ntBASIC17.14■□□□□ 0.33
SMOQ99835 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.14■□□□□ 0.33
SMOQ99835 AC138649.4-201ENST00000612222 287 ntBASIC17.14■□□□□ 0.33
SMOQ99835 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.14■□□□□ 0.33
SMOQ99835 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.14■□□□□ 0.33
SMOQ99835 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.14■□□□□ 0.33
SMOQ99835 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SMOQ99835 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMOQ99835 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMOQ99835 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMOQ99835 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.14■□□□□ 0.33
SMOQ99835 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMOQ99835 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.14■□□□□ 0.33
SMOQ99835 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms