Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CSMD1Q96PZ7 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CSMD1Q96PZ7 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSMD1Q96PZ7 AC004461.2-201ENST00000629517 803 ntBASIC13.8□□□□□ -0.2
CSMD1Q96PZ7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSMD1Q96PZ7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC13.8□□□□□ -0.2
CSMD1Q96PZ7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.8□□□□□ -0.2
CSMD1Q96PZ7 AC091804.1-201ENST00000486888 567 ntBASIC13.8□□□□□ -0.2
CSMD1Q96PZ7 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.8□□□□□ -0.2
CSMD1Q96PZ7 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.8□□□□□ -0.2
CSMD1Q96PZ7 AC091167.2-201ENST00000579581 588 ntBASIC13.8□□□□□ -0.2
CSMD1Q96PZ7 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC13.8□□□□□ -0.2
CSMD1Q96PZ7 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.8□□□□□ -0.2
CSMD1Q96PZ7 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.8□□□□□ -0.2
CSMD1Q96PZ7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSMD1Q96PZ7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CSMD1Q96PZ7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CSMD1Q96PZ7 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSMD1Q96PZ7 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSMD1Q96PZ7 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.8□□□□□ -0.2
CSMD1Q96PZ7 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.8□□□□□ -0.2
CSMD1Q96PZ7 AC004898.1-201ENST00000451057 766 ntBASIC13.8□□□□□ -0.2
CSMD1Q96PZ7 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC13.8□□□□□ -0.2
CSMD1Q96PZ7 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.8□□□□□ -0.2
CSMD1Q96PZ7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 AC234644.1-201ENST00000406065 370 ntBASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 CASP16P-204ENST00000635032 809 ntBASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 YBX1P6-201ENST00000442962 1002 ntBASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 AC008687.7-202ENST00000637404 953 ntBASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSMD1Q96PZ7 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 AKR7A2P1-201ENST00000460134 915 ntBASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 AC104784.1-201ENST00000473096 294 ntBASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 AL645608.8-201ENST00000606034 2086 ntBASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.78□□□□□ -0.2
CSMD1Q96PZ7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms