Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX11Q96FC9 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX11Q96FC9 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
DDX11Q96FC9 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.54■□□□□ 0.72
DDX11Q96FC9 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
DDX11Q96FC9 AC022145.2-201ENST00000598203 171 ntBASIC19.54■□□□□ 0.72
DDX11Q96FC9 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX11Q96FC9 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
DDX11Q96FC9 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX11Q96FC9 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
DDX11Q96FC9 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
DDX11Q96FC9 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.54■□□□□ 0.72
DDX11Q96FC9 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX11Q96FC9 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
DDX11Q96FC9 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX11Q96FC9 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX11Q96FC9 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX11Q96FC9 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
DDX11Q96FC9 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX11Q96FC9 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
DDX11Q96FC9 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX11Q96FC9 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
DDX11Q96FC9 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDX11Q96FC9 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
DDX11Q96FC9 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDX11Q96FC9 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.53■□□□□ 0.72
DDX11Q96FC9 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
DDX11Q96FC9 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
DDX11Q96FC9 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDX11Q96FC9 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
DDX11Q96FC9 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
DDX11Q96FC9 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.53■□□□□ 0.72
DDX11Q96FC9 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDX11Q96FC9 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
DDX11Q96FC9 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.53■□□□□ 0.72
DDX11Q96FC9 MIR770-201ENST00000390219 98 ntBASIC19.53■□□□□ 0.72
DDX11Q96FC9 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.53■□□□□ 0.72
DDX11Q96FC9 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.53■□□□□ 0.72
DDX11Q96FC9 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.53■□□□□ 0.72
DDX11Q96FC9 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.53■□□□□ 0.72
DDX11Q96FC9 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
DDX11Q96FC9 CICP6-201ENST00000457191 2729 ntBASIC19.53■□□□□ 0.72
DDX11Q96FC9 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.53■□□□□ 0.72
DDX11Q96FC9 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDX11Q96FC9 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
DDX11Q96FC9 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.53■□□□□ 0.72
DDX11Q96FC9 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
DDX11Q96FC9 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.53■□□□□ 0.72
DDX11Q96FC9 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDX11Q96FC9 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDX11Q96FC9 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDX11Q96FC9 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC19.53■□□□□ 0.72
DDX11Q96FC9 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDX11Q96FC9 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
DDX11Q96FC9 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDX11Q96FC9 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.53■□□□□ 0.72
DDX11Q96FC9 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
DDX11Q96FC9 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
DDX11Q96FC9 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDX11Q96FC9 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDX11Q96FC9 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDX11Q96FC9 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDX11Q96FC9 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
DDX11Q96FC9 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDX11Q96FC9 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDX11Q96FC9 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
DDX11Q96FC9 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDX11Q96FC9 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.52■□□□□ 0.72
DDX11Q96FC9 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
DDX11Q96FC9 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.52■□□□□ 0.72
DDX11Q96FC9 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC19.52■□□□□ 0.72
DDX11Q96FC9 AGK-211ENST00000629555 2765 ntTSL 5 BASIC19.52■□□□□ 0.72
DDX11Q96FC9 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
DDX11Q96FC9 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDX11Q96FC9 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
DDX11Q96FC9 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.52■□□□□ 0.72
DDX11Q96FC9 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.52■□□□□ 0.72
DDX11Q96FC9 TIMM8BP1-201ENST00000452384 211 ntBASIC19.52■□□□□ 0.72
DDX11Q96FC9 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
DDX11Q96FC9 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.52■□□□□ 0.72
DDX11Q96FC9 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.52■□□□□ 0.72
DDX11Q96FC9 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.52■□□□□ 0.72
DDX11Q96FC9 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.52■□□□□ 0.72
DDX11Q96FC9 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDX11Q96FC9 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.52■□□□□ 0.72
DDX11Q96FC9 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
DDX11Q96FC9 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.52■□□□□ 0.72
DDX11Q96FC9 AL645728.2-201ENST00000641974 660 ntBASIC19.52■□□□□ 0.72
DDX11Q96FC9 AL139011.1-202ENST00000642063 584 ntBASIC19.52■□□□□ 0.72
DDX11Q96FC9 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDX11Q96FC9 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDX11Q96FC9 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
DDX11Q96FC9 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
DDX11Q96FC9 ACE-204ENST00000428043 5120 ntTSL 2 BASIC19.52■□□□□ 0.71
DDX11Q96FC9 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
DDX11Q96FC9 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
DDX11Q96FC9 ME2P1-201ENST00000426028 1970 ntBASIC19.52■□□□□ 0.71
DDX11Q96FC9 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
DDX11Q96FC9 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX11Q96FC9 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms