Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RTP4Q96DX8 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RTP4Q96DX8 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
RTP4Q96DX8 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RTP4Q96DX8 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTP4Q96DX8 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTP4Q96DX8 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RTP4Q96DX8 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTP4Q96DX8 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RTP4Q96DX8 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
RTP4Q96DX8 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.73■□□□□ 0.27
RTP4Q96DX8 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.73■□□□□ 0.27
RTP4Q96DX8 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTP4Q96DX8 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTP4Q96DX8 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTP4Q96DX8 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTP4Q96DX8 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RTP4Q96DX8 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTP4Q96DX8 AC132872.4-202ENST00000622924 2756 ntBASIC16.72■□□□□ 0.27
RTP4Q96DX8 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RTP4Q96DX8 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
RTP4Q96DX8 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTP4Q96DX8 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
RTP4Q96DX8 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.72■□□□□ 0.27
RTP4Q96DX8 AC016027.1-202ENST00000607927 1699 ntBASIC16.72■□□□□ 0.27
RTP4Q96DX8 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTP4Q96DX8 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTP4Q96DX8 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTP4Q96DX8 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.72■□□□□ 0.27
RTP4Q96DX8 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.72■□□□□ 0.27
RTP4Q96DX8 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RTP4Q96DX8 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTP4Q96DX8 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTP4Q96DX8 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTP4Q96DX8 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTP4Q96DX8 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTP4Q96DX8 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.72■□□□□ 0.27
RTP4Q96DX8 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.72■□□□□ 0.27
RTP4Q96DX8 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.72■□□□□ 0.27
RTP4Q96DX8 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.72■□□□□ 0.27
RTP4Q96DX8 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.72■□□□□ 0.27
RTP4Q96DX8 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.72■□□□□ 0.27
RTP4Q96DX8 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.72■□□□□ 0.27
RTP4Q96DX8 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RTP4Q96DX8 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTP4Q96DX8 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTP4Q96DX8 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTP4Q96DX8 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.72■□□□□ 0.27
RTP4Q96DX8 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.72■□□□□ 0.27
RTP4Q96DX8 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTP4Q96DX8 PAUPAR-201ENST00000630360 2965 ntBASIC16.72■□□□□ 0.27
RTP4Q96DX8 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTP4Q96DX8 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RTP4Q96DX8 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTP4Q96DX8 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.72■□□□□ 0.27
RTP4Q96DX8 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTP4Q96DX8 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTP4Q96DX8 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
RTP4Q96DX8 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.72■□□□□ 0.27
RTP4Q96DX8 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTP4Q96DX8 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTP4Q96DX8 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTP4Q96DX8 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTP4Q96DX8 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.72■□□□□ 0.27
RTP4Q96DX8 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RTP4Q96DX8 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTP4Q96DX8 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTP4Q96DX8 AC025580.3-201ENST00000617932 1424 ntBASIC16.71■□□□□ 0.27
RTP4Q96DX8 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTP4Q96DX8 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RTP4Q96DX8 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
RTP4Q96DX8 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RTP4Q96DX8 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RTP4Q96DX8 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTP4Q96DX8 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.71■□□□□ 0.27
RTP4Q96DX8 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
RTP4Q96DX8 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.71■□□□□ 0.27
RTP4Q96DX8 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.71■□□□□ 0.27
RTP4Q96DX8 DNAJB3-201ENST00000446806 729 ntBASIC16.71■□□□□ 0.27
RTP4Q96DX8 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.71■□□□□ 0.27
RTP4Q96DX8 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RTP4Q96DX8 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
RTP4Q96DX8 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.71■□□□□ 0.27
RTP4Q96DX8 KRT19P2-202ENST00000557173 1012 ntBASIC16.71■□□□□ 0.27
RTP4Q96DX8 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.71■□□□□ 0.27
RTP4Q96DX8 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.71■□□□□ 0.27
RTP4Q96DX8 MIR3687-2-201ENST00000577708 61 ntBASIC16.71■□□□□ 0.27
RTP4Q96DX8 AC064836.3-201ENST00000607928 673 ntBASIC16.71■□□□□ 0.27
RTP4Q96DX8 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
RTP4Q96DX8 MIR3687-1-201ENST00000614492 61 ntBASIC16.71■□□□□ 0.27
RTP4Q96DX8 AC004877.2-201ENST00000623941 599 ntBASIC16.71■□□□□ 0.27
RTP4Q96DX8 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTP4Q96DX8 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTP4Q96DX8 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTP4Q96DX8 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.71■□□□□ 0.27
RTP4Q96DX8 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
RTP4Q96DX8 AC073439.1-201ENST00000624121 1774 ntBASIC16.71■□□□□ 0.27
RTP4Q96DX8 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTP4Q96DX8 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.71■□□□□ 0.27
RTP4Q96DX8 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms