Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AL031731.1-201ENST00000642131 2094 ntBASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 AC006033.1-201ENST00000440505 426 ntBASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 AL355864.2-201ENST00000447420 863 ntBASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 AC124283.3-201ENST00000570869 594 ntBASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 RN7SL190P-201ENST00000582519 257 ntBASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 AL118558.3-201ENST00000607414 1079 ntBASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 AC244669.2-201ENST00000612320 853 ntBASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 AC006538.1-201ENST00000567905 1585 ntBASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM43Q96BQ3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 AC135050.7-201ENST00000624508 2218 ntBASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM43Q96BQ3 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
TRIM43Q96BQ3 MSTO2P-201ENST00000314835 1709 ntBASIC17.58■□□□□ 0.41
TRIM43Q96BQ3 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM43Q96BQ3 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
TRIM43Q96BQ3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM43Q96BQ3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
TRIM43Q96BQ3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.58■□□□□ 0.41
TRIM43Q96BQ3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM43Q96BQ3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.58■□□□□ 0.41
TRIM43Q96BQ3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM43Q96BQ3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM43Q96BQ3 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM43Q96BQ3 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.58■□□□□ 0.41
TRIM43Q96BQ3 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.58■□□□□ 0.41
TRIM43Q96BQ3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms