Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.65□□□□□ -0.06
RFT1Q96AA3 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFT1Q96AA3 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.65□□□□□ -0.06
RFT1Q96AA3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.65□□□□□ -0.06
RFT1Q96AA3 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RFT1Q96AA3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.65□□□□□ -0.06
RFT1Q96AA3 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFT1Q96AA3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.65□□□□□ -0.06
RFT1Q96AA3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.64□□□□□ -0.07
RFT1Q96AA3 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFT1Q96AA3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFT1Q96AA3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFT1Q96AA3 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFT1Q96AA3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.64□□□□□ -0.07
RFT1Q96AA3 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFT1Q96AA3 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFT1Q96AA3 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFT1Q96AA3 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.64□□□□□ -0.07
RFT1Q96AA3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFT1Q96AA3 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFT1Q96AA3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.64□□□□□ -0.07
RFT1Q96AA3 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
RFT1Q96AA3 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFT1Q96AA3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFT1Q96AA3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFT1Q96AA3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFT1Q96AA3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
RFT1Q96AA3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
RFT1Q96AA3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.64□□□□□ -0.07
RFT1Q96AA3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.64□□□□□ -0.07
RFT1Q96AA3 FAM210CP-201ENST00000445714 574 ntBASIC14.64□□□□□ -0.07
RFT1Q96AA3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.64□□□□□ -0.07
RFT1Q96AA3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.64□□□□□ -0.07
RFT1Q96AA3 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.64□□□□□ -0.07
RFT1Q96AA3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.64□□□□□ -0.07
RFT1Q96AA3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
RFT1Q96AA3 MIR3180-1-201ENST00000580374 94 ntBASIC14.64□□□□□ -0.07
RFT1Q96AA3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.64□□□□□ -0.07
RFT1Q96AA3 MIR3180-3-201ENST00000584616 94 ntBASIC14.64□□□□□ -0.07
RFT1Q96AA3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.64□□□□□ -0.07
RFT1Q96AA3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.64□□□□□ -0.07
RFT1Q96AA3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFT1Q96AA3 AC092119.3-201ENST00000612618 583 ntBASIC14.64□□□□□ -0.07
RFT1Q96AA3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.64□□□□□ -0.07
RFT1Q96AA3 AL590326.2-201ENST00000625139 305 ntBASIC14.64□□□□□ -0.07
RFT1Q96AA3 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RFT1Q96AA3 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.64□□□□□ -0.07
RFT1Q96AA3 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFT1Q96AA3 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFT1Q96AA3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RFT1Q96AA3 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFT1Q96AA3 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFT1Q96AA3 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFT1Q96AA3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.64□□□□□ -0.07
RFT1Q96AA3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RFT1Q96AA3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.64□□□□□ -0.07
RFT1Q96AA3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFT1Q96AA3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFT1Q96AA3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFT1Q96AA3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.64□□□□□ -0.07
RFT1Q96AA3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFT1Q96AA3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFT1Q96AA3 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
RFT1Q96AA3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.63□□□□□ -0.07
RFT1Q96AA3 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFT1Q96AA3 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RFT1Q96AA3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RFT1Q96AA3 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RFT1Q96AA3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RFT1Q96AA3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFT1Q96AA3 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RFT1Q96AA3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RFT1Q96AA3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFT1Q96AA3 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFT1Q96AA3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFT1Q96AA3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RFT1Q96AA3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFT1Q96AA3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RFT1Q96AA3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFT1Q96AA3 SPDYE21P-201ENST00000413323 827 ntBASIC14.63□□□□□ -0.07
RFT1Q96AA3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC14.63□□□□□ -0.07
RFT1Q96AA3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.63□□□□□ -0.07
RFT1Q96AA3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
RFT1Q96AA3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.63□□□□□ -0.07
RFT1Q96AA3 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFT1Q96AA3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.63□□□□□ -0.07
RFT1Q96AA3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.63□□□□□ -0.07
RFT1Q96AA3 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.63□□□□□ -0.07
RFT1Q96AA3 AL358472.4-201ENST00000633140 710 ntBASIC14.63□□□□□ -0.07
RFT1Q96AA3 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.63□□□□□ -0.07
RFT1Q96AA3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.63□□□□□ -0.07
RFT1Q96AA3 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
RFT1Q96AA3 AC004817.3-201ENST00000602957 2129 ntBASIC14.63□□□□□ -0.07
RFT1Q96AA3 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFT1Q96AA3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.63□□□□□ -0.07
RFT1Q96AA3 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFT1Q96AA3 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFT1Q96AA3 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFT1Q96AA3 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFT1Q96AA3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms