Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPTSSAQ969W0 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SPTSSAQ969W0 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.44□□□□□ -0.1
SPTSSAQ969W0 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.44□□□□□ -0.1
SPTSSAQ969W0 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPTSSAQ969W0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.44□□□□□ -0.1
SPTSSAQ969W0 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPTSSAQ969W0 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SPTSSAQ969W0 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPTSSAQ969W0 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPTSSAQ969W0 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPTSSAQ969W0 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
SPTSSAQ969W0 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPTSSAQ969W0 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPTSSAQ969W0 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
SPTSSAQ969W0 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPTSSAQ969W0 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.44□□□□□ -0.1
SPTSSAQ969W0 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SPTSSAQ969W0 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
SPTSSAQ969W0 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPTSSAQ969W0 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SPTSSAQ969W0 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 AC009078.2-202ENST00000463353 338 ntBASIC14.43□□□□□ -0.1
SPTSSAQ969W0 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 AC023141.13-201ENST00000604991 943 ntBASIC14.43□□□□□ -0.1
SPTSSAQ969W0 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
SPTSSAQ969W0 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.42□□□□□ -0.1
SPTSSAQ969W0 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.42□□□□□ -0.1
SPTSSAQ969W0 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SPTSSAQ969W0 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPTSSAQ969W0 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPTSSAQ969W0 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPTSSAQ969W0 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SPTSSAQ969W0 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPTSSAQ969W0 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SPTSSAQ969W0 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SPTSSAQ969W0 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPTSSAQ969W0 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SPTSSAQ969W0 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.42□□□□□ -0.1
SPTSSAQ969W0 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SPTSSAQ969W0 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPTSSAQ969W0 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
SPTSSAQ969W0 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.42□□□□□ -0.1
SPTSSAQ969W0 IGLL3P-201ENST00000412472 434 ntBASIC14.42□□□□□ -0.1
SPTSSAQ969W0 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.42□□□□□ -0.1
SPTSSAQ969W0 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.42□□□□□ -0.1
SPTSSAQ969W0 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.42□□□□□ -0.1
SPTSSAQ969W0 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.42□□□□□ -0.1
SPTSSAQ969W0 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.42□□□□□ -0.1
SPTSSAQ969W0 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
SPTSSAQ969W0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPTSSAQ969W0 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SPTSSAQ969W0 AC010507.1-201ENST00000633895 436 ntBASIC14.42□□□□□ -0.1
SPTSSAQ969W0 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SPTSSAQ969W0 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.42□□□□□ -0.1
SPTSSAQ969W0 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SPTSSAQ969W0 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPTSSAQ969W0 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPTSSAQ969W0 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.42□□□□□ -0.1
SPTSSAQ969W0 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPTSSAQ969W0 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPTSSAQ969W0 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms