Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 AC026396.1-201ENST00000419388 421 ntBASIC14.54□□□□□ -0.08
AP3S1Q92572 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S1Q92572 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC14.54□□□□□ -0.08
AP3S1Q92572 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
AP3S1Q92572 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S1Q92572 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S1Q92572 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
AP3S1Q92572 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
AP3S1Q92572 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S1Q92572 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S1Q92572 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.54□□□□□ -0.08
AP3S1Q92572 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S1Q92572 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S1Q92572 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S1Q92572 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.54□□□□□ -0.08
AP3S1Q92572 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S1Q92572 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.54□□□□□ -0.08
AP3S1Q92572 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S1Q92572 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S1Q92572 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S1Q92572 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S1Q92572 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.54□□□□□ -0.08
AP3S1Q92572 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S1Q92572 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S1Q92572 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S1Q92572 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
AP3S1Q92572 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.53□□□□□ -0.08
AP3S1Q92572 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.53□□□□□ -0.08
AP3S1Q92572 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP3S1Q92572 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
AP3S1Q92572 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.53□□□□□ -0.08
AP3S1Q92572 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP3S1Q92572 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP3S1Q92572 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.53□□□□□ -0.08
AP3S1Q92572 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
AP3S1Q92572 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.53□□□□□ -0.08
AP3S1Q92572 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.53□□□□□ -0.08
AP3S1Q92572 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
AP3S1Q92572 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP3S1Q92572 AL512652.2-201ENST00000625156 1716 ntBASIC14.53□□□□□ -0.08
AP3S1Q92572 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.53□□□□□ -0.08
AP3S1Q92572 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
AP3S1Q92572 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.53□□□□□ -0.08
AP3S1Q92572 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP3S1Q92572 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP3S1Q92572 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.53□□□□□ -0.08
AP3S1Q92572 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
AP3S1Q92572 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
AP3S1Q92572 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.53□□□□□ -0.08
AP3S1Q92572 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.53□□□□□ -0.08
AP3S1Q92572 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
AP3S1Q92572 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14.53□□□□□ -0.08
AP3S1Q92572 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC14.53□□□□□ -0.08
AP3S1Q92572 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP3S1Q92572 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP3S1Q92572 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP3S1Q92572 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.53□□□□□ -0.08
AP3S1Q92572 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP3S1Q92572 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
AP3S1Q92572 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
AP3S1Q92572 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.53□□□□□ -0.08
AP3S1Q92572 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
AP3S1Q92572 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
AP3S1Q92572 AC132938.5-201ENST00000624980 1813 ntBASIC14.52□□□□□ -0.08
AP3S1Q92572 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
AP3S1Q92572 GRK6P1-201ENST00000400595 1711 ntBASIC14.52□□□□□ -0.08
AP3S1Q92572 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
AP3S1Q92572 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
AP3S1Q92572 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.52□□□□□ -0.08
AP3S1Q92572 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
AP3S1Q92572 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
AP3S1Q92572 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.52□□□□□ -0.08
AP3S1Q92572 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
AP3S1Q92572 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.52□□□□□ -0.08
AP3S1Q92572 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC14.52□□□□□ -0.08
AP3S1Q92572 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
AP3S1Q92572 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
AP3S1Q92572 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.52□□□□□ -0.08
AP3S1Q92572 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
AP3S1Q92572 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.52□□□□□ -0.08
AP3S1Q92572 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.52□□□□□ -0.08
AP3S1Q92572 AC005089.1-201ENST00000619486 2241 ntBASIC14.52□□□□□ -0.08
AP3S1Q92572 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
AP3S1Q92572 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
AP3S1Q92572 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
AP3S1Q92572 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.52□□□□□ -0.09
AP3S1Q92572 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.52□□□□□ -0.09
AP3S1Q92572 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC14.52□□□□□ -0.09
AP3S1Q92572 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
AP3S1Q92572 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC14.52□□□□□ -0.09
AP3S1Q92572 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.52□□□□□ -0.09
AP3S1Q92572 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.52□□□□□ -0.09
AP3S1Q92572 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.52□□□□□ -0.09
AP3S1Q92572 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
AP3S1Q92572 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
AP3S1Q92572 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.52□□□□□ -0.09
AP3S1Q92572 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.52□□□□□ -0.09
AP3S1Q92572 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
AP3S1Q92572 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
AP3S1Q92572 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms