Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.7■□□□□ 0.26
PTCD2Q8WV60 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTCD2Q8WV60 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTCD2Q8WV60 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTCD2Q8WV60 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTCD2Q8WV60 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTCD2Q8WV60 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTCD2Q8WV60 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC16.7■□□□□ 0.26
PTCD2Q8WV60 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.7■□□□□ 0.26
PTCD2Q8WV60 FAM58CP-201ENST00000435741 640 ntBASIC16.7■□□□□ 0.26
PTCD2Q8WV60 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.7■□□□□ 0.26
PTCD2Q8WV60 AC004967.1-201ENST00000453589 447 ntBASIC16.7■□□□□ 0.26
PTCD2Q8WV60 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.7■□□□□ 0.26
PTCD2Q8WV60 YBX1P5-201ENST00000509441 847 ntBASIC16.7■□□□□ 0.26
PTCD2Q8WV60 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.7■□□□□ 0.26
PTCD2Q8WV60 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
PTCD2Q8WV60 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTCD2Q8WV60 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.7■□□□□ 0.26
PTCD2Q8WV60 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC16.7■□□□□ 0.26
PTCD2Q8WV60 AC021097.1-201ENST00000607902 574 ntBASIC16.7■□□□□ 0.26
PTCD2Q8WV60 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.7■□□□□ 0.26
PTCD2Q8WV60 AC091812.2-201ENST00000619081 385 ntBASIC16.7■□□□□ 0.26
PTCD2Q8WV60 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC16.7■□□□□ 0.26
PTCD2Q8WV60 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC16.7■□□□□ 0.26
PTCD2Q8WV60 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTCD2Q8WV60 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.7■□□□□ 0.26
PTCD2Q8WV60 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTCD2Q8WV60 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTCD2Q8WV60 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTCD2Q8WV60 CROCCP1-201ENST00000426910 5675 ntBASIC16.7■□□□□ 0.26
PTCD2Q8WV60 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTCD2Q8WV60 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTCD2Q8WV60 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTCD2Q8WV60 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.69■□□□□ 0.26
PTCD2Q8WV60 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTCD2Q8WV60 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.69■□□□□ 0.26
PTCD2Q8WV60 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCD2Q8WV60 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCD2Q8WV60 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCD2Q8WV60 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCD2Q8WV60 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTCD2Q8WV60 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.69■□□□□ 0.26
PTCD2Q8WV60 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCD2Q8WV60 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCD2Q8WV60 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PTCD2Q8WV60 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTCD2Q8WV60 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCD2Q8WV60 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.69■□□□□ 0.26
PTCD2Q8WV60 RNU1-129P-201ENST00000384064 167 ntBASIC16.69■□□□□ 0.26
PTCD2Q8WV60 PMS2P4-201ENST00000412466 1052 ntBASIC16.69■□□□□ 0.26
PTCD2Q8WV60 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.69■□□□□ 0.26
PTCD2Q8WV60 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTCD2Q8WV60 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PTCD2Q8WV60 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.69■□□□□ 0.26
PTCD2Q8WV60 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.69■□□□□ 0.26
PTCD2Q8WV60 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PTCD2Q8WV60 AP002472.1-201ENST00000577490 586 ntBASIC16.69■□□□□ 0.26
PTCD2Q8WV60 U1.21-201ENST00000580816 167 ntBASIC16.69■□□□□ 0.26
PTCD2Q8WV60 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTCD2Q8WV60 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTCD2Q8WV60 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PTCD2Q8WV60 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.69■□□□□ 0.26
PTCD2Q8WV60 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCD2Q8WV60 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PTCD2Q8WV60 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCD2Q8WV60 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTCD2Q8WV60 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCD2Q8WV60 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCD2Q8WV60 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCD2Q8WV60 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCD2Q8WV60 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCD2Q8WV60 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
PTCD2Q8WV60 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTCD2Q8WV60 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PTCD2Q8WV60 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTCD2Q8WV60 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.68■□□□□ 0.26
PTCD2Q8WV60 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTCD2Q8WV60 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTCD2Q8WV60 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PTCD2Q8WV60 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTCD2Q8WV60 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PTCD2Q8WV60 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.68■□□□□ 0.26
PTCD2Q8WV60 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTCD2Q8WV60 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PTCD2Q8WV60 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTCD2Q8WV60 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTCD2Q8WV60 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTCD2Q8WV60 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTCD2Q8WV60 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
PTCD2Q8WV60 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTCD2Q8WV60 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.68■□□□□ 0.26
PTCD2Q8WV60 SMIM26-201ENST00000411646 505 ntAPPRIS P5 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTCD2Q8WV60 AC211486.1-202ENST00000416371 468 ntBASIC16.68■□□□□ 0.26
PTCD2Q8WV60 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTCD2Q8WV60 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTCD2Q8WV60 IMMP2L-204ENST00000447215 1164 ntTSL 3 BASIC16.68■□□□□ 0.26
PTCD2Q8WV60 DNAJB3-202ENST00000449667 1266 ntBASIC16.68■□□□□ 0.26
PTCD2Q8WV60 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
PTCD2Q8WV60 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.68■□□□□ 0.26
PTCD2Q8WV60 AC092183.1-201ENST00000469884 875 ntBASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms