Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 AC093724.1-201ENST00000448659 1027 ntBASIC17.4■□□□□ 0.38
UBA3Q8TBC4 AC004967.1-201ENST00000453589 447 ntBASIC17.4■□□□□ 0.38
UBA3Q8TBC4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 AL513210.1-201ENST00000629608 234 ntBASIC17.4■□□□□ 0.38
UBA3Q8TBC4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
UBA3Q8TBC4 REXO1L8P-201ENST00000604378 1897 ntBASIC17.39■□□□□ 0.38
UBA3Q8TBC4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.39■□□□□ 0.38
UBA3Q8TBC4 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
UBA3Q8TBC4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBA3Q8TBC4 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBA3Q8TBC4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBA3Q8TBC4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
UBA3Q8TBC4 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.39■□□□□ 0.37
UBA3Q8TBC4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.39■□□□□ 0.37
UBA3Q8TBC4 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBA3Q8TBC4 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
UBA3Q8TBC4 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.39■□□□□ 0.37
UBA3Q8TBC4 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.39■□□□□ 0.37
UBA3Q8TBC4 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBA3Q8TBC4 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBA3Q8TBC4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.39■□□□□ 0.37
UBA3Q8TBC4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.39■□□□□ 0.37
UBA3Q8TBC4 POU5F1P6-201ENST00000466990 990 ntBASIC17.39■□□□□ 0.37
UBA3Q8TBC4 AC069335.1-201ENST00000489972 472 ntBASIC17.39■□□□□ 0.37
UBA3Q8TBC4 IGHV3-62-201ENST00000520057 340 ntBASIC17.39■□□□□ 0.37
UBA3Q8TBC4 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
UBA3Q8TBC4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.39■□□□□ 0.37
UBA3Q8TBC4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
UBA3Q8TBC4 AC139530.3-201ENST00000620344 690 ntBASIC17.39■□□□□ 0.37
UBA3Q8TBC4 AC008267.7-201ENST00000624570 1194 ntBASIC17.39■□□□□ 0.37
UBA3Q8TBC4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.39■□□□□ 0.37
UBA3Q8TBC4 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
UBA3Q8TBC4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
UBA3Q8TBC4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
UBA3Q8TBC4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBA3Q8TBC4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBA3Q8TBC4 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBA3Q8TBC4 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBA3Q8TBC4 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
UBA3Q8TBC4 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
UBA3Q8TBC4 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBA3Q8TBC4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.39■□□□□ 0.37
UBA3Q8TBC4 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBA3Q8TBC4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.39■□□□□ 0.37
UBA3Q8TBC4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
UBA3Q8TBC4 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBA3Q8TBC4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBA3Q8TBC4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.38■□□□□ 0.37
UBA3Q8TBC4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBA3Q8TBC4 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBA3Q8TBC4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBA3Q8TBC4 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBA3Q8TBC4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBA3Q8TBC4 UXT-AS1-201ENST00000590504 1525 ntBASIC17.38■□□□□ 0.37
UBA3Q8TBC4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBA3Q8TBC4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBA3Q8TBC4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBA3Q8TBC4 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
UBA3Q8TBC4 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBA3Q8TBC4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.38■□□□□ 0.37
UBA3Q8TBC4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.38■□□□□ 0.37
UBA3Q8TBC4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
UBA3Q8TBC4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.38■□□□□ 0.37
UBA3Q8TBC4 AC005237.2-201ENST00000434368 219 ntBASIC17.38■□□□□ 0.37
UBA3Q8TBC4 DNAJB3-202ENST00000449667 1266 ntBASIC17.38■□□□□ 0.37
UBA3Q8TBC4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.38■□□□□ 0.37
UBA3Q8TBC4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
UBA3Q8TBC4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.38■□□□□ 0.37
UBA3Q8TBC4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.38■□□□□ 0.37
UBA3Q8TBC4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.38■□□□□ 0.37
UBA3Q8TBC4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.38■□□□□ 0.37
UBA3Q8TBC4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms