Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHKBP1Q8TBC3 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SHKBP1Q8TBC3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.23■□□□□ 0.35
SHKBP1Q8TBC3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SHKBP1Q8TBC3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.23■□□□□ 0.35
SHKBP1Q8TBC3 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SHKBP1Q8TBC3 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.23■□□□□ 0.35
SHKBP1Q8TBC3 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHKBP1Q8TBC3 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.23■□□□□ 0.35
SHKBP1Q8TBC3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHKBP1Q8TBC3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.23■□□□□ 0.35
SHKBP1Q8TBC3 AC060834.1-201ENST00000443027 2032 ntBASIC17.23■□□□□ 0.35
SHKBP1Q8TBC3 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHKBP1Q8TBC3 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHKBP1Q8TBC3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SHKBP1Q8TBC3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SHKBP1Q8TBC3 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHKBP1Q8TBC3 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHKBP1Q8TBC3 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SHKBP1Q8TBC3 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.23■□□□□ 0.35
SHKBP1Q8TBC3 FAM220BP-201ENST00000377689 816 ntBASIC17.23■□□□□ 0.35
SHKBP1Q8TBC3 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.23■□□□□ 0.35
SHKBP1Q8TBC3 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.23■□□□□ 0.35
SHKBP1Q8TBC3 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.23■□□□□ 0.35
SHKBP1Q8TBC3 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.23■□□□□ 0.35
SHKBP1Q8TBC3 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.23■□□□□ 0.35
SHKBP1Q8TBC3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.23■□□□□ 0.35
SHKBP1Q8TBC3 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.23■□□□□ 0.35
SHKBP1Q8TBC3 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHKBP1Q8TBC3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SHKBP1Q8TBC3 AL391005.1-201ENST00000623953 2435 ntBASIC17.23■□□□□ 0.35
SHKBP1Q8TBC3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SHKBP1Q8TBC3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.23■□□□□ 0.35
SHKBP1Q8TBC3 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SHKBP1Q8TBC3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SHKBP1Q8TBC3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHKBP1Q8TBC3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.23■□□□□ 0.35
SHKBP1Q8TBC3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SHKBP1Q8TBC3 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHKBP1Q8TBC3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 HLA-V-204ENST00000476601 1289 ntBASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 AC012645.4-201ENST00000610691 1061 ntBASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 AL035252.4-201ENST00000624174 288 ntBASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SHKBP1Q8TBC3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.21■□□□□ 0.35
SHKBP1Q8TBC3 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms